RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PCP11498 1178 aaKnown RBP5.43□□□□□ -1.54
SNCA-213ENST00000618500 PDE4DQ08499 809 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 KCNC3Q14003 757 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 MFSD10Q14728 455 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 ZDHHC14Q8IZN3 488 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 ATOH1Q92858 354 aaPredicted RBP5.43□□□□□ -1.54
SNCA-213ENST00000618500 CLEC1BQ9P126 229 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 CLIP2Q9UDT6 1046 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 NOD1Q9Y239 953 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 LZTS1Q9Y250 596 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 TTC28Q96AY4 2481 aa5.43□□□□□ -1.54
SNCA-213ENST00000618500 SLC3A2P08195 630 aaKnown RBP5.42□□□□□ -1.54
SNCA-213ENST00000618500 SRGAP2BP0DMP2 458 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 ZKSCAN2Q63HK3 967 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 NOL8Q76FK4 1167 aaKnown RBP5.42□□□□□ -1.54
SNCA-213ENST00000618500 CPXCR1Q8N123 301 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 FIBCD1Q8N539 461 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 RHPN1Q8TCX5 695 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 RSPH1Q8WYR4 309 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 APPBP2Q92624 585 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 IL17RAQ96F46 866 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 RHOBTB2Q9BYZ6 727 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 CLDND1Q9NY35 253 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 CCPG1Q9ULG6 757 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 NR2E1Q9Y466 385 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 MYH6P13533 1939 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 MUC3AQ02505 3323 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 CARNS1A5YM72 827 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 TMEM232C9JQI7 657 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 VCPP55072 806 aaKnown RBP5.42□□□□□ -1.54
SNCA-213ENST00000618500 PDE4BQ07343 736 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 MGAT3Q09327 533 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 ZNF618Q5T7W0 954 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 SYDE2Q5VT97 1194 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 ASCL5Q7RTU5 278 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 CRBNQ96SW2 442 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 MKNK2Q9HBH9 465 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 PRRC2BQ5JSZ5 2229 aaKnown RBP5.42□□□□□ -1.54
SNCA-213ENST00000618500 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.42□□□□□ -1.54
SNCA-213ENST00000618500 GOLIM4O00461 696 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 ADAM17P78536 824 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 DUSP6Q16828 381 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 ASTLQ6HA08 431 aaPredicted RBP5.42□□□□□ -1.54
SNCA-213ENST00000618500 SLC30A10Q6XR72 485 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.42□□□□□ -1.54
SNCA-213ENST00000618500 CCDC105Q8IYK2 499 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 ZNF444Q8N0Y2 327 aaPredicted RBP5.42□□□□□ -1.54
SNCA-213ENST00000618500 CLASRPQ8N2M8 674 aaKnown RBP5.42□□□□□ -1.54
SNCA-213ENST00000618500 TMEM57Q8N5G2 664 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 GPR161Q8N6U8 529 aaKnown RBP5.42□□□□□ -1.54
SNCA-213ENST00000618500 NECTIN4Q96NY8 510 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 EHMT1Q9H9B1 1298 aa5.42□□□□□ -1.54
SNCA-213ENST00000618500 EPB41L4AQ9HCS5 686 aaPredicted RBP5.42□□□□□ -1.54
SNCA-213ENST00000618500 LAMA2P24043 3122 aaKnown RBP5.41□□□□□ -1.54
SNCA-213ENST00000618500 RSPH10B2B2RC85 870 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 H3BQ06 376 aaPredicted RBP5.41□□□□□ -1.54
SNCA-213ENST00000618500 STAM2O75886 525 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 RSPH10BP0C881 870 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 TXNP10599 105 aaKnown RBP5.41□□□□□ -1.54
SNCA-213ENST00000618500 ALAS1P13196 640 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 HOXB8P17481 243 aaPredicted RBP5.41□□□□□ -1.54
SNCA-213ENST00000618500 SLC1A4P43007 532 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 BAATQ14032 418 aaPredicted RBP5.41□□□□□ -1.54
SNCA-213ENST00000618500 TMEM63BQ5T3F8 832 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 RNF207Q6ZRF8 634 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 C7orf31Q8N865 590 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 S1PR5Q9H228 398 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 DDX41Q9UJV9 622 aaKnown RBP5.41□□□□□ -1.54
SNCA-213ENST00000618500 TECTAO75443 2155 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 CYP2D7A0A087X1C5 515 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 PATL2C9JE40 543 aaKnown RBP5.41□□□□□ -1.54
SNCA-213ENST00000618500 PPFIA4O75335 1185 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 ARIH2O95376 493 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 TGFB3P10600 412 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 GNAT1P11488 350 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 PUM1Q14671 1186 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNCA-213ENST00000618500 ALX1Q15699 326 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 FAM47CQ5HY64 1035 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 MCF2L2Q86YR7 1114 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 NPAS4Q8IUM7 802 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 YME1L1Q96TA2 773 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 TSHZ2Q9NRE2 1034 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 DLL3Q9NYJ7 618 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 HDAC6Q9UBN7 1215 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 TRPC6Q9Y210 931 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 USP15Q9Y4E8 981 aaPredicted RBP5.41□□□□□ -1.54
SNCA-213ENST00000618500 CCDC171Q6TFL3 1326 aa5.41□□□□□ -1.54
SNCA-213ENST00000618500 KMT2BQ9UMN6 2715 aaPredicted RBP5.4□□□□□ -1.54
SNCA-213ENST00000618500 EIF3JO75822 258 aaKnown RBP5.4□□□□□ -1.54
SNCA-213ENST00000618500 DGKIO75912 1065 aa5.4□□□□□ -1.54
SNCA-213ENST00000618500 CTNNB1P35222 781 aa5.4□□□□□ -1.54
SNCA-213ENST00000618500 RRP1P56182 461 aaKnown RBP5.4□□□□□ -1.54
SNCA-213ENST00000618500 KBTBD3Q8NAB2 608 aa5.4□□□□□ -1.54
SNCA-213ENST00000618500 NKD2Q969F2 451 aaPredicted RBP5.4□□□□□ -1.54
SNCA-213ENST00000618500 TTC14Q96N46 770 aa5.4□□□□□ -1.54
SNCA-213ENST00000618500 FTHL17Q9BXU8 183 aa5.4□□□□□ -1.54
SNCA-213ENST00000618500 PLAGL2Q9UPG8 496 aa5.4□□□□□ -1.54
SNCA-213ENST00000618500 SORCS3Q9UPU3 1222 aa5.4□□□□□ -1.54
SNCA-213ENST00000618500 TTC3P53804 2025 aa5.4□□□□□ -1.54
SNCA-213ENST00000618500 C17orf102A2RUQ5 167 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms