RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 RTN1Q16799 776 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 CELF3Q5SZQ8 465 aaKnown RBP25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 PSRC1Q6PGN9 363 aaPredicted RBP25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 KCNV1Q6PIU1 500 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 HEATR3Q7Z4Q2 680 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 PPTC7Q8NI37 304 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 KAT2BQ92831 832 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 SPATA33Q96N06 139 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 PBX4Q9BYU1 374 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 RTEL1Q9NZ71 1219 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 PRUNE2Q8WUY3 3088 aa25.41■■□□□ 1.66
SYNGR3-206ENST00000618464 KLF18A0A0U1RQI7 1052 aa25.41■■□□□ 1.66
SYNGR3-206ENST00000618464 FGD1P98174 961 aa25.41■■□□□ 1.66
SYNGR3-206ENST00000618464 MYSM1Q5VVJ2 828 aa25.41■■□□□ 1.66
SYNGR3-206ENST00000618464 JAKMIP1Q96N16 626 aaKnown RBP25.41■■□□□ 1.66
SYNGR3-206ENST00000618464 PSTPIP2Q9H939 334 aa25.41■■□□□ 1.66
SYNGR3-206ENST00000618464 RBM28Q9NW13 759 aaKnown RBP25.41■■□□□ 1.66
SYNGR3-206ENST00000618464 CXXC1Q9P0U4 656 aaPredicted RBP25.41■■□□□ 1.66
SYNGR3-206ENST00000618464 NOD1Q9Y239 953 aa25.41■■□□□ 1.66
SYNGR3-206ENST00000618464 CNTNAP5Q8WYK1 1306 aa25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 GOLGA8AA7E2F4 631 aa25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 GOLGA8BA8MQT2 603 aa25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 PIK3CDO00329 1044 aa25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 HMGB1P09429 215 aaKnown RBP25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 PTPN11Q06124 597 aaPredicted RBP25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 UBE2SQ16763 222 aa25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 GNPTABQ3T906 1256 aa25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 HERVK_113Q902F9 699 aa25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 ALG1Q9BT22 464 aa25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 SNX14Q9Y5W7 946 aa25.4■■□□□ 1.66
SYNGR3-206ENST00000618464 CUL9Q8IWT3 2517 aa25.39■■□□□ 1.66
SYNGR3-206ENST00000618464 FGBP02675 491 aa25.39■■□□□ 1.66
SYNGR3-206ENST00000618464 TGFB3P10600 412 aa25.39■■□□□ 1.66
SYNGR3-206ENST00000618464 HSPA4P34932 840 aa25.39■■□□□ 1.66
SYNGR3-206ENST00000618464 PSEN2P49810 448 aa25.39■■□□□ 1.66
SYNGR3-206ENST00000618464 HSDL1Q3SXM5 330 aa25.39■■□□□ 1.66
SYNGR3-206ENST00000618464 GDF6Q6KF10 455 aaPredicted RBP25.39■■□□□ 1.66
SYNGR3-206ENST00000618464 KCNB2Q92953 911 aa25.39■■□□□ 1.66
SYNGR3-206ENST00000618464 BCAS3Q9H6U6 928 aa25.39■■□□□ 1.66
SYNGR3-206ENST00000618464 MLXIPQ9HAP2 919 aa25.39■■□□□ 1.66
SYNGR3-206ENST00000618464 VCANP13611 3396 aa25.38■■□□□ 1.65
SYNGR3-206ENST00000618464 REC8O95072 547 aa25.38■■□□□ 1.65
SYNGR3-206ENST00000618464 MFSD10Q14728 455 aa25.38■■□□□ 1.65
SYNGR3-206ENST00000618464 PTGISQ16647 500 aa25.38■■□□□ 1.65
SYNGR3-206ENST00000618464 OTOP2Q7RTS6 562 aa25.38■■□□□ 1.65
SYNGR3-206ENST00000618464 INPP4AQ96PE3 977 aaPredicted RBP25.38■■□□□ 1.65
SYNGR3-206ENST00000618464 STAM2O75886 525 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 APOBRQ0VD83 1088 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 SEMA3FQ13275 785 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 KIAA0753Q2KHM9 967 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 PCNX4Q63HM2 1172 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 WWC2Q6AWC2 1192 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 BLOC1S2Q6QNY1 142 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 Q6ZUG5 572 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 DEFB128Q7Z7B8 93 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 C7orf31Q8N865 590 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 VWCEQ96DN2 955 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 KATNAL1Q9BW62 490 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 HDAC6Q9UBN7 1215 aa25.37■■□□□ 1.65
SYNGR3-206ENST00000618464 SPATA31C2B4DYI2 1134 aa25.36■■□□□ 1.65
SYNGR3-206ENST00000618464 F2P00734 622 aa25.36■■□□□ 1.65
SYNGR3-206ENST00000618464 CDC27P30260 824 aa25.36■■□□□ 1.65
SYNGR3-206ENST00000618464 ICAM3P32942 547 aa25.36■■□□□ 1.65
SYNGR3-206ENST00000618464 FUT2Q10981 343 aa25.36■■□□□ 1.65
SYNGR3-206ENST00000618464 SESTD1Q86VW0 696 aa25.36■■□□□ 1.65
SYNGR3-206ENST00000618464 RPUSD2Q8IZ73 545 aaKnown RBP25.36■■□□□ 1.65
SYNGR3-206ENST00000618464 USP38Q8NB14 1042 aa25.36■■□□□ 1.65
SYNGR3-206ENST00000618464 RETREG2Q8NC44 543 aa25.36■■□□□ 1.65
SYNGR3-206ENST00000618464 V9GY48 417 aaPredicted RBP25.36■■□□□ 1.65
SYNGR3-206ENST00000618464 FIBPO43427 364 aa25.35■■□□□ 1.65
SYNGR3-206ENST00000618464 PPFIA4O75335 1185 aa25.35■■□□□ 1.65
SYNGR3-206ENST00000618464 HOXD8P13378 290 aaPredicted RBP25.35■■□□□ 1.65
SYNGR3-206ENST00000618464 CYFIP1Q7L576 1253 aa25.35■■□□□ 1.65
SYNGR3-206ENST00000618464 BRF1Q92994 677 aa25.35■■□□□ 1.65
SYNGR3-206ENST00000618464 MTIF3Q9H2K0 278 aaKnown RBP25.35■■□□□ 1.65
SYNGR3-206ENST00000618464 FAM217BQ9NTX9 383 aaPredicted RBP25.35■■□□□ 1.65
SYNGR3-206ENST00000618464 SCN5AQ14524 2016 aa25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 SPDYE3A6NKU9 549 aa25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 HAS3O00219 553 aa25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 NOP56O00567 594 aaKnown RBP25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 NAPAP54920 295 aa25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 BFSP2Q13515 415 aa25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 XRRA1Q6P2D8 792 aa25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 CTAGE1Q96RT6 745 aa25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 PRDM12Q9H4Q4 367 aa25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 GTF2IRD1Q9UHL9 959 aa25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 DOCK5Q9H7D0 1870 aa25.34■■□□□ 1.65
SYNGR3-206ENST00000618464 PITPNM1O00562 1244 aa25.33■■□□□ 1.65
SYNGR3-206ENST00000618464 METAP2P50579 478 aaKnown RBP eCLIP25.33■■□□□ 1.65
SYNGR3-206ENST00000618464 SP4Q02446 784 aa25.33■■□□□ 1.65
SYNGR3-206ENST00000618464 NEDD9Q14511 834 aa25.33■■□□□ 1.65
SYNGR3-206ENST00000618464 TYW1BQ6NUM6 668 aa25.33■■□□□ 1.65
SYNGR3-206ENST00000618464 PPP4R2Q9NY27 417 aa25.33■■□□□ 1.65
SYNGR3-206ENST00000618464 PCDHA6Q9UN73 950 aa25.33■■□□□ 1.65
SYNGR3-206ENST00000618464 PCDHA8Q9Y5H6 950 aa25.33■■□□□ 1.65
SYNGR3-206ENST00000618464 ZBBXA8MT70 800 aa25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 IQCF3P0C7M6 154 aa25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 RPS6KB1P23443 525 aa25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 ADD1P35611 737 aaKnown RBP25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 METTL7BQ6UX53 244 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms