RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	RXRB	P28702	533 aa		11.79	□□□□□ -0.52
CPEB1-215	ENST00000617958	MATR3	P43243	847 aa	Known RBP eCLIP	11.79	□□□□□ -0.52	6e-6	■■■■□ 20.3
CPEB1-215	ENST00000617958	CTCF	P49711	727 aa	Predicted RBP	11.79	□□□□□ -0.52
CPEB1-215	ENST00000617958	ANKRD20A2	Q5SQ80	823 aa		11.79	□□□□□ -0.52
CPEB1-215	ENST00000617958	ANKRD20A1	Q5TYW2	823 aa		11.79	□□□□□ -0.52
CPEB1-215	ENST00000617958	ANKRD20A3	Q5VUR7	823 aa		11.79	□□□□□ -0.52
CPEB1-215	ENST00000617958	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.79	□□□□□ -0.52
CPEB1-215	ENST00000617958	OSBPL1A	Q9BXW6	950 aa		11.79	□□□□□ -0.52
CPEB1-215	ENST00000617958	EXOC1	Q9NV70	894 aa		11.79	□□□□□ -0.52
CPEB1-215	ENST00000617958	PANK4	Q9NVE7	773 aa		11.79	□□□□□ -0.52
CPEB1-215	ENST00000617958	CCNL1	Q9UK58	526 aa	Predicted RBP	11.79	□□□□□ -0.52
CPEB1-215	ENST00000617958	LRRD1	A4D1F6	860 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	GOLGA8A	A7E2F4	631 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	ZNF263	O14978	683 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	ATP2A2	P16615	1042 aa	Known RBP	11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	ABL2	P42684	1182 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	TNNC1	P63316	161 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	TRPM8	Q7Z2W7	1104 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	PNMA8A	Q86V59	439 aa	Predicted RBP	11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	PROM2	Q8N271	834 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	IFT81	Q8WYA0	676 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	TLCD1	Q96CP7	247 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	HINFP	Q9BQA5	517 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	METTL22	Q9BUU2	404 aa	Predicted RBP	11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	POLD4	Q9HCU8	107 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	PLAGL2	Q9UPG8	496 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958		A0A087WZG4	1122 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	GNAT1	P11488	350 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	TRIM21	P19474	475 aa	Known RBP	11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	RCAN1	P53805	252 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	EIF3B	P55884	814 aa	Known RBP	11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	ARHGAP22	Q7Z5H3	698 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	FAM81A	Q8TBF8	368 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	NAF1	Q96HR8	494 aa	Known RBP	11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	ERGIC2	Q96RQ1	377 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	CNOT8	Q9UFF9	292 aa	Known RBP	11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	LRRC42	Q9Y546	428 aa		11.78	□□□□□ -0.52
CPEB1-215	ENST00000617958	XDH	P47989	1333 aa		11.77	□□□□□ -0.52
CPEB1-215	ENST00000617958	TRIM75P	A6NK02	468 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	TMOD1	P28289	359 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	GUCY2F	P51841	1108 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	HAND2	P61296	217 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	DYNC1I2	Q13409	638 aa	Known RBP	11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	TRIM74	Q86UV6	250 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	TRIM73	Q86UV7	250 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	SLC51A	Q86UW1	340 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	DZIP3	Q86Y13	1208 aa	Known RBP	11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	RAB11FIP4	Q86YS3	637 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	ATL2	Q8NHH9	583 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	B4GALNT2	Q8NHY0	566 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	APPBP2	Q92624	585 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	SYMPK	Q92797	1274 aa	Known RBP	11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	NOX5	Q96PH1	765 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	GORASP1	Q9BQQ3	440 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	TMEM59L	Q9UK28	342 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	SMIM24	O75264	130 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	RNF8	O76064	485 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	MOCS3	O95396	460 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	IFIT1	P09914	478 aa	Known RBP	11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	CTNNA1	P35221	906 aa	Known RBP	11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	UAP1	Q16222	522 aa	Predicted RBP	11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	KLHDC7A	Q5VTJ3	777 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	TRIM22	Q8IYM9	498 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	ADSSL1	Q8N142	457 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	CFAP61	Q8NHU2	1237 aa		11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.77	□□□□□ -0.53
CPEB1-215	ENST00000617958	BTAF1	O14981	1849 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	LAMB4	A4D0S4	1761 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	PHF20L1	A8MW92	1017 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	GNPAT	O15228	680 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	DEXI	O95424	95 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	ECHS1	P30084	290 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	ALDH3A1	P30838	453 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	RBM5	P52756	815 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	CUL3	Q13618	768 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	GALNTL6	Q49A17	601 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	ODF2	Q5BJF6	829 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	ZNF772	Q68DY9	489 aa	Predicted RBP	11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	ARHGAP27	Q6ZUM4	889 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	LMNTD2	Q8IXW0	634 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	PLBD2	Q8NHP8	589 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	IGDCC4	Q8TDY8	1250 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	IFT74	Q96LB3	600 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	EPAS1	Q99814	870 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	SLC26A6	Q9BXS9	759 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	NSRP1	Q9H0G5	558 aa	Known RBP	11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	AGPAT5	Q9NUQ2	364 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	CCDC87	Q9NVE4	849 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	WDR35	Q9P2L0	1181 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	CYP27A1	Q02318	531 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	MTA1	Q13330	715 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	PDXDC2P	Q6P474	469 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	EPSTI1	Q96J88	318 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	MLXIP	Q9HAP2	919 aa		11.76	□□□□□ -0.53
CPEB1-215	ENST00000617958	VPS54	Q9P1Q0	977 aa		11.76	□□□□□ -0.53

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