RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 DHX38Q92620 1227 aaKnown RBP9.97□□□□□ -0.81
GPC6-202ENST00000617456 RAD9AQ99638 391 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 LNPKQ9C0E8 428 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 LMCD1Q9NZU5 365 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 CCDC171Q6TFL3 1326 aa9.97□□□□□ -0.81
GPC6-202ENST00000617456 TANC1Q9C0D5 1861 aa9.96□□□□□ -0.81
GPC6-202ENST00000617456 A0A0D9SFI3 127 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 LINC01553A4QN01 128 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 TRIM6-TRIM34B2RNG4 842 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 B4DLN1 442 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 NBNO60934 754 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 GJB5O95377 273 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 IL9P15248 144 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 EDNRBP24530 442 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 MRPL12P52815 198 aaKnown RBP9.96□□□□□ -0.82
GPC6-202ENST00000617456 ERVK-21P61565 698 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 CSPP1Q1MSJ5 1256 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 LEXMQ3ZCV2 418 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 USH1GQ495M9 461 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 VPS53Q5VIR6 699 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 PTCRAQ6ISU1 281 aaPredicted RBP9.96□□□□□ -0.82
GPC6-202ENST00000617456 MFSD6Q6ZSS7 791 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 EP400NLQ6ZTU2 488 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 DGKHQ86XP1 1220 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 FBXO22Q8NEZ5 403 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 ESR2Q92731 530 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 FAM227BQ96M60 508 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 CTAGE1Q96RT6 745 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 TMEM47Q9BQJ4 181 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 ALG1Q9BT22 464 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 CTNNA3Q9UI47 895 aa9.96□□□□□ -0.82
GPC6-202ENST00000617456 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.95□□□□□ -0.82
GPC6-202ENST00000617456 ABHD14A-ACY1A0A1B0GW23 586 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 PRR33A8MZF0 331 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 H3BQ06 376 aaPredicted RBP9.95□□□□□ -0.82
GPC6-202ENST00000617456 ZNF213O14771 459 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 GH1P01241 217 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 IGHDP01880 384 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 TPM2P07951 284 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 SNHG28P0DPA3 235 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 CKBP12277 381 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 PSEN1P49768 467 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 NMIQ13287 307 aaPredicted RBP9.95□□□□□ -0.82
GPC6-202ENST00000617456 IKBKEQ14164 716 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 GPATCH4Q5T3I0 446 aaKnown RBP9.95□□□□□ -0.82
GPC6-202ENST00000617456 C7orf31Q8N865 590 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 DNERQ8NFT8 737 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 ANKS1AQ92625 1134 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 KAT2BQ92831 832 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 C17orf80Q9BSJ5 609 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 DSCC1Q9BVC3 393 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 HDAC6Q9UBN7 1215 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 PTPRSQ13332 1948 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 MYO7AQ13402 2215 aa9.95□□□□□ -0.82
GPC6-202ENST00000617456 SORBS3O60504 671 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 CXCL10P02778 98 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 GOLGA8HP0CJ92 632 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 PDHBP11177 359 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 ALADP13716 330 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 CASTP20810 708 aaKnown RBP9.94□□□□□ -0.82
GPC6-202ENST00000617456 PSEN2P49810 448 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 MRE11P49959 708 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 ZNF200P98182 395 aaPredicted RBP9.94□□□□□ -0.82
GPC6-202ENST00000617456 ARHGAP1Q07960 439 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 ZNF543Q08ER8 600 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 CCDC62Q6P9F0 684 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
GPC6-202ENST00000617456 ZNF589Q86UQ0 364 aaPredicted RBP9.94□□□□□ -0.82
GPC6-202ENST00000617456 SESTD1Q86VW0 696 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 IQCA1Q86XH1 822 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 MYOCDQ8IZQ8 938 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 TBC1D5Q92609 795 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 WNT8BQ93098 351 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 RILPL2Q969X0 211 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 UBA5Q9GZZ9 404 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 CPVLQ9H3G5 476 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 CNNM2Q9H8M5 875 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 GTF2IRD1Q9UHL9 959 aa9.94□□□□□ -0.82
GPC6-202ENST00000617456 WDR19Q8NEZ3 1342 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 GRXCR2A6NFK2 248 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 EFCAB14O75071 495 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 PARNO95453 639 aaKnown RBP9.93□□□□□ -0.82
GPC6-202ENST00000617456 ZNF286BP0CG31 522 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 RBL2Q08999 1139 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 PTK7Q13308 1070 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 MFSD10Q14728 455 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 DGKDQ16760 1214 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 PTPROQ16827 1216 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 IMMTQ16891 758 aaKnown RBP9.93□□□□□ -0.82
GPC6-202ENST00000617456 ZNF618Q5T7W0 954 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 B4GALNT3Q6L9W6 998 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 EXOC6Q8TAG9 804 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 TAAR1Q96RJ0 339 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 DIAPH3Q9NSV4 1193 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 INSL6Q9Y581 213 aa9.93□□□□□ -0.82
GPC6-202ENST00000617456 DCXO43602 365 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 LGR5O75473 907 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 KIF20AO95235 890 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 AMHP03971 560 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 EIF2AK2P19525 551 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms