RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 SDCCAG8Q86SQ7 713 aaPredicted RBP20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 KRT12Q99456 494 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 ISCA1Q9BUE6 129 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 FAM49AQ9H0Q0 323 aaPredicted RBP20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 DPH5Q9H2P9 285 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 GJB4Q9NTQ9 266 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 RNF181Q9P0P0 153 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 TCP1P17987 556 aaKnown RBP20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 ETF1P62495 437 aaKnown RBP20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 NLRP4Q96MN2 994 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 CDHR2Q9BYE9 1310 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 CPSF1Q10570 1443 aaKnown RBP20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 BFSP1Q12934 665 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 SRGAP1Q7Z6B7 1085 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 TBC1D10CQ8IV04 446 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 AFAP1L2Q8N4X5 818 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 ATP2A3Q93084 1043 aa20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 DCP1AQ9NPI6 582 aaPredicted RBP20.2■□□□□ 0.82
AC008878.3-201ENST00000617428 OVOS2A0A0G2JMS6 1433 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 OVOS2A0A0J9YW53 1432 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 OVOS2Q6IE36 1432 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 NFX1Q12986 1120 aaKnown RBP20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 SPP2Q13103 211 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 PTPN21Q16825 1174 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 STAG1Q8WVM7 1258 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 PRKAG2Q9UGJ0 569 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 THAP12O43422 761 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 RC3H1Q5TC82 1133 aaKnown RBP20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 TMTC3Q6ZXV5 915 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 SRPRBQ9Y5M8 271 aaKnown RBP20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 NBPF26B4DH59 902 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 ZNF658Q5TYW1 1059 aaPredicted RBP20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 NBPF10Q6P3W6 841 aaKnown RBP20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 LRRC8AQ8IWT6 810 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 NBPF15Q8N660 670 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 PKNOX2Q96KN3 472 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 RMDN3Q96TC7 470 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 CCDC94Q9BW85 323 aaPredicted RBP20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 SNX25Q9H3E2 840 aa20.19■□□□□ 0.82
AC008878.3-201ENST00000617428 MAN2A1Q16706 1144 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 WHAMMP3Q1A5X7 153 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 C4orf50Q6ZRC1 276 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 VSIG1Q86XK7 387 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 MAP7D3Q8IWC1 876 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 BZW2Q9Y6E2 419 aaKnown RBP20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 PSDA5PKW4 1024 aaPredicted RBP20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 A6NJR5 290 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 GOLGA8SH3BPF8 625 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 K7ERI5 159 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 DDIT3P35638 169 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 PPP2R5EQ16537 467 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 SPATA24Q86W54 205 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 CACTINQ8WUQ7 758 aaKnown RBP20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 CCDC160A6NGH7 325 aa20.18■□□□□ 0.82
AC008878.3-201ENST00000617428 SETD1BQ9UPS6 1966 aaKnown RBP20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 I3L4J1 428 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 RAVER2Q9HCJ3 691 aaKnown RBP20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 HOXC10Q9NYD6 342 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 CDC42BPGQ6DT37 1551 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 H7C0C1 242 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 NMT2O60551 498 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 ATP5OP48047 213 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 ARPP19P56211 112 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L15C9J2P7 530 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L13C9JLJ4 530 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L11C9JVI0 530 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L18D6R9N7 530 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L22D6RA61 530 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L17D6RBQ6 530 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L19D6RCP7 530 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L20D6RJB6 530 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 ZBTB5O15062 677 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 LMNB1P20700 586 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L24Q0WX57 530 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L6PQ6QN14 398 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 METTL23Q86XA0 190 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 ANKRD42Q8N9B4 389 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 GRK7Q8WTQ7 553 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 MAN1B1Q9UKM7 699 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 CTNNA1P35221 906 aaKnown RBP20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 NT5C2P49902 561 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 GPSM2P81274 684 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 PPFIA1Q13136 1202 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 ZNF710Q8N1W2 664 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 P3H4Q92791 437 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 STMN2Q93045 179 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 CEP95Q96GE4 821 aa20.17■□□□□ 0.82
AC008878.3-201ENST00000617428 RGS16O15492 202 aaPredicted RBP20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 PTPREP23469 700 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 MXI1P50539 228 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 ERCC6LQ2NKX8 1250 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 MGARPQ8TDB4 240 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 DCAF4Q8WV16 495 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 RRAGDQ9NQL2 400 aaPredicted RBP20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 MYL1P05976 194 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 UHMK1Q8TAS1 419 aaKnown RBP20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 CPDO75976 1380 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 UTYO14607 1347 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 ZNF653Q96CK0 615 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 HINFPQ9BQA5 517 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms