RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 DYNLL2Q96FJ2 89 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 KDM7AQ6ZMT4 941 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 IQCKQ8N0W5 287 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 LSM14BQ9BX40 385 aaKnown RBP14.48□□□□□ -0.09
MSH6-214ENST00000616033 OSBPL7Q9BZF2 842 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 TRIM6Q9C030 488 aaPredicted RBP14.48□□□□□ -0.09
MSH6-214ENST00000616033 LRRC4CQ9HCJ2 640 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 TPX2Q9ULW0 747 aaKnown RBP14.48□□□□□ -0.09
MSH6-214ENST00000616033 PLAGL2Q9UPG8 496 aa14.48□□□□□ -0.09
MSH6-214ENST00000616033 GMNCA6NCL1 334 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 RAD21O60216 631 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 FSBPO95073 299 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 SPTY2D1Q68D10 685 aaPredicted RBP14.47□□□□□ -0.09
MSH6-214ENST00000616033 CACNA2D3Q8IZS8 1091 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 TNFRSF25Q93038 417 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 TRIM9Q9C026 710 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 ZCWPW1Q9H0M4 648 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 RBM28Q9NW13 759 aaKnown RBP14.47□□□□□ -0.09
MSH6-214ENST00000616033 MCM9Q9NXL9 1143 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 AMACRQ9UHK6 382 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 FBXL5Q9UKA1 691 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 ATP8A1Q9Y2Q0 1164 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 L3MBTL1Q9Y468 752 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 CD2APQ9Y5K6 639 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 USP17L3A6NCW0 530 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 USP17L4A6NCW7 530 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 DAPK3O43293 454 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 FAM107AO95990 144 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 HSD17B3P37058 310 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 IGHMBP2P38935 993 aaKnown RBP14.47□□□□□ -0.09
MSH6-214ENST00000616033 SLCO1A2P46721 670 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 ACCSLQ4AC99 568 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 USP17L1Q7RTZ2 530 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 TFAP4Q01664 338 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 MYO1EQ12965 1108 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 MGARPQ8TDB4 240 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 TFCP2L1Q9NZI6 479 aa14.47□□□□□ -0.09
MSH6-214ENST00000616033 ZNF142P52746 1687 aaPredicted RBP14.47□□□□□ -0.09
MSH6-214ENST00000616033 NAPAP54920 295 aa14.46□□□□□ -0.09
MSH6-214ENST00000616033 FAM182BQ5T319 152 aa14.46□□□□□ -0.09
MSH6-214ENST00000616033 MAEAQ7L5Y9 396 aa14.46□□□□□ -0.09
MSH6-214ENST00000616033 KIAA0895Q8NCT3 520 aa14.46□□□□□ -0.09
MSH6-214ENST00000616033 SEC16BQ96JE7 1060 aa14.46□□□□□ -0.09
MSH6-214ENST00000616033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.46□□□□□ -0.094e-7■■■□□ 16.5
MSH6-214ENST00000616033 CNOT8Q9UFF9 292 aaKnown RBP14.46□□□□□ -0.09
MSH6-214ENST00000616033 RHOBTB3O94955 611 aa14.46□□□□□ -0.09
MSH6-214ENST00000616033 ERVK-9P63128 1117 aa14.46□□□□□ -0.09
MSH6-214ENST00000616033 DHTKD1Q96HY7 919 aaPredicted RBP14.46□□□□□ -0.09
MSH6-214ENST00000616033 MLXIPLQ9NP71 852 aa14.46□□□□□ -0.09
MSH6-214ENST00000616033 LEMD3Q9Y2U8 911 aa14.46□□□□□ -0.09
MSH6-214ENST00000616033 VIMP08670 466 aaKnown RBP14.46□□□□□ -0.1
MSH6-214ENST00000616033 USP17L8P0C7I0 530 aa14.46□□□□□ -0.1
MSH6-214ENST00000616033 KLHL30Q0D2K2 578 aa14.46□□□□□ -0.1
MSH6-214ENST00000616033 ITGB3BPQ13352 177 aaPredicted RBP14.46□□□□□ -0.1
MSH6-214ENST00000616033 SLC9C1Q4G0N8 1177 aa14.46□□□□□ -0.1
MSH6-214ENST00000616033 FUKQ8N0W3 1084 aa14.46□□□□□ -0.1
MSH6-214ENST00000616033 SLC44A5Q8NCS7 719 aa14.46□□□□□ -0.1
MSH6-214ENST00000616033 PARD3BQ8TEW8 1205 aa14.46□□□□□ -0.1
MSH6-214ENST00000616033 NEUROG2Q9H2A3 272 aa14.46□□□□□ -0.1
MSH6-214ENST00000616033 MKNK2Q9HBH9 465 aa14.46□□□□□ -0.1
MSH6-214ENST00000616033 FBXO3Q9UK99 471 aa14.46□□□□□ -0.1
MSH6-214ENST00000616033 STK38LQ9Y2H1 464 aa14.46□□□□□ -0.1
MSH6-214ENST00000616033 A0A087X0T9 212 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 POTEMA6NI47 508 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 CTNND1O60716 968 aaKnown RBP14.45□□□□□ -0.1
MSH6-214ENST00000616033 FAM228BP0C875 321 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 ITGA4P13612 1032 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 DHX9Q08211 1270 aaKnown RBP14.45□□□□□ -0.1
MSH6-214ENST00000616033 ADCY1Q08828 1119 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 SFMBT2Q5VUG0 894 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 TCERG1LQ5VWI1 586 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 HVCN1Q96D96 273 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 PYM1Q9BRP8 204 aaKnown RBP14.45□□□□□ -0.1
MSH6-214ENST00000616033 SEPT11Q9NVA2 429 aaKnown RBP14.45□□□□□ -0.1
MSH6-214ENST00000616033 SLIT3O75094 1523 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 SMTNP53814 917 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 TNNC1P63316 161 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 CHRNDQ07001 517 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 RPS6KA1Q15418 735 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 PFKFB3Q16875 520 aaPredicted RBP14.45□□□□□ -0.1
MSH6-214ENST00000616033 AP1ARQ63HQ0 302 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 ZNF513Q8N8E2 541 aaPredicted RBP14.45□□□□□ -0.1
MSH6-214ENST00000616033 RAPGEF5Q92565 580 aa14.45□□□□□ -0.1
MSH6-214ENST00000616033 PURBQ96QR8 312 aaKnown RBP14.45□□□□□ -0.1
MSH6-214ENST00000616033 ACTN1P12814 892 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 CALRP27797 417 aaKnown RBP14.44□□□□□ -0.1
MSH6-214ENST00000616033 RETREG2Q8NC44 543 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 PNMA1Q8ND90 353 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 CAVIN3Q969G5 261 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 CALML4Q96GE6 196 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 CAMTA1Q9Y6Y1 1673 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 STRCP1A6NGW2 1772 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 KRIT1O00522 736 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 MICAL1Q8TDZ2 1067 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 SPDL1Q96EA4 605 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 UBA5Q9GZZ9 404 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 PNMA2Q9UL42 364 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 PCDHA4Q9UN74 947 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 CALML3P27482 149 aa14.44□□□□□ -0.1
MSH6-214ENST00000616033 SCTRP47872 440 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms