RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 RAB11FIP4Q86YS3 637 aa26.19■■□□□ 1.78
FAM228B-208ENST00000613899 CMTR1Q8N1G2 835 aaKnown RBP26.19■■□□□ 1.78
FAM228B-208ENST00000613899 C7orf31Q8N865 590 aa26.19■■□□□ 1.78
FAM228B-208ENST00000613899 INPP4AQ96PE3 977 aaPredicted RBP26.19■■□□□ 1.78
FAM228B-208ENST00000613899 MLXIPQ9HAP2 919 aa26.19■■□□□ 1.78
FAM228B-208ENST00000613899 PPFIA4O75335 1185 aa26.18■■□□□ 1.78
FAM228B-208ENST00000613899 HSDL1Q3SXM5 330 aa26.18■■□□□ 1.78
FAM228B-208ENST00000613899 GDF6Q6KF10 455 aaPredicted RBP26.18■■□□□ 1.78
FAM228B-208ENST00000613899 XRRA1Q6P2D8 792 aa26.18■■□□□ 1.78
FAM228B-208ENST00000613899 APOA5Q6Q788 366 aa26.18■■□□□ 1.78
FAM228B-208ENST00000613899 USP17L6PQ6QN14 398 aa26.18■■□□□ 1.78
FAM228B-208ENST00000613899 DHX32Q7L7V1 743 aaKnown RBP26.18■■□□□ 1.78
FAM228B-208ENST00000613899 GBF1Q92538 1859 aa26.18■■□□□ 1.78
FAM228B-208ENST00000613899 ZNF576Q9H609 170 aa26.18■■□□□ 1.78
FAM228B-208ENST00000613899 RBM28Q9NW13 759 aaKnown RBP26.18■■□□□ 1.78
FAM228B-208ENST00000613899 GTF2IRD1Q9UHL9 959 aa26.18■■□□□ 1.78
FAM228B-208ENST00000613899 CDH23Q9H251 3354 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 GRXCR1A8MXD5 290 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 MEIS2O14770 477 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 IQCF3P0C7M6 154 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 ICAM3P32942 547 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 MRPS9P82933 396 aaKnown RBP26.17■■□□□ 1.78
FAM228B-208ENST00000613899 SP2Q02086 613 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 KIAA0753Q2KHM9 967 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 PCNX4Q63HM2 1172 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 DEFB128Q7Z7B8 93 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 MYLIPQ8WY64 445 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 GPKOWQ92917 476 aaPredicted RBP eCLIP26.17■■□□□ 1.78
FAM228B-208ENST00000613899 ZFP91Q96JP5 570 aaPredicted RBP26.17■■□□□ 1.78
FAM228B-208ENST00000613899 ALG1Q9BT22 464 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 MSRAQ9UJ68 235 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 SLC4A7Q9Y6M7 1214 aa26.17■■□□□ 1.78
FAM228B-208ENST00000613899 TRIP12Q14669 1992 aaPredicted RBP26.16■■□□□ 1.78
FAM228B-208ENST00000613899 ZBBXA8MT70 800 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 HAS3O00219 553 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 FIBPO43427 364 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 SORBS3O60504 671 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 ACTN1P12814 892 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 FOSL2P15408 326 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 EXOSC10Q01780 885 aaKnown RBP26.16■■□□□ 1.78
FAM228B-208ENST00000613899 NEDD9Q14511 834 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 RASEFQ8IZ41 740 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 AFAP1L1Q8TED9 768 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 VWCEQ96DN2 955 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 PSTPIP2Q9H939 334 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 HDAC6Q9UBN7 1215 aa26.16■■□□□ 1.78
FAM228B-208ENST00000613899 HMGB1P09429 215 aaKnown RBP26.15■■□□□ 1.78
FAM228B-208ENST00000613899 PBX2P40425 430 aa26.15■■□□□ 1.78
FAM228B-208ENST00000613899 ADCK5Q3MIX3 580 aa26.15■■□□□ 1.78
FAM228B-208ENST00000613899 CCDC82Q8N4S0 544 aa26.15■■□□□ 1.78
FAM228B-208ENST00000613899 CTAGE1Q96RT6 745 aa26.15■■□□□ 1.78
FAM228B-208ENST00000613899 SPATA31C2B4DYI2 1134 aa26.14■■□□□ 1.78
FAM228B-208ENST00000613899 NOP56O00567 594 aaKnown RBP26.14■■□□□ 1.78
FAM228B-208ENST00000613899 RBL2Q08999 1139 aa26.14■■□□□ 1.78
FAM228B-208ENST00000613899 METTL7BQ6UX53 244 aa26.14■■□□□ 1.78
FAM228B-208ENST00000613899 TCEANC2Q96MN5 208 aa26.14■■□□□ 1.78
FAM228B-208ENST00000613899 RTEL1Q9NZ71 1219 aa26.14■■□□□ 1.78
FAM228B-208ENST00000613899 CNTNAP5Q8WYK1 1306 aa26.14■■□□□ 1.77
FAM228B-208ENST00000613899 DOCK5Q9H7D0 1870 aa26.13■■□□□ 1.77
FAM228B-208ENST00000613899 hCG_1642624A0A1W2PR95 340 aa26.13■■□□□ 1.77
FAM228B-208ENST00000613899 ZBTB43O43298 467 aa26.13■■□□□ 1.77
FAM228B-208ENST00000613899 GRIN2CQ14957 1233 aa26.13■■□□□ 1.77
FAM228B-208ENST00000613899 RTN1Q16799 776 aa26.13■■□□□ 1.77
FAM228B-208ENST00000613899 HEATR3Q7Z4Q2 680 aa26.13■■□□□ 1.77
FAM228B-208ENST00000613899 NLRX1Q86UT6 975 aa26.13■■□□□ 1.77
FAM228B-208ENST00000613899 MAFAQ8NHW3 353 aaPredicted RBP26.13■■□□□ 1.77
FAM228B-208ENST00000613899 PARNO95453 639 aaKnown RBP26.12■■□□□ 1.77
FAM228B-208ENST00000613899 SELPP16109 830 aa26.12■■□□□ 1.77
FAM228B-208ENST00000613899 RCAN1P53805 252 aa26.12■■□□□ 1.77
FAM228B-208ENST00000613899 SEMA3FQ13275 785 aa26.12■■□□□ 1.77
FAM228B-208ENST00000613899 PTK7Q13308 1070 aa26.12■■□□□ 1.77
FAM228B-208ENST00000613899 SENP7Q9BQF6 1050 aa26.12■■□□□ 1.77
FAM228B-208ENST00000613899 C16orf70Q9BSU1 422 aa26.12■■□□□ 1.77
FAM228B-208ENST00000613899 FTOQ9C0B1 505 aaKnown RBP eCLIP26.12■■□□□ 1.77
FAM228B-208ENST00000613899 SPDYE3A6NKU9 549 aa26.11■■□□□ 1.77
FAM228B-208ENST00000613899 LGALS2P05162 132 aa26.11■■□□□ 1.77
FAM228B-208ENST00000613899 ATP2A2P16615 1042 aaKnown RBP26.11■■□□□ 1.77
FAM228B-208ENST00000613899 LRRC8DQ7L1W4 858 aa26.11■■□□□ 1.77
FAM228B-208ENST00000613899 CYFIP1Q7L576 1253 aa26.11■■□□□ 1.77
FAM228B-208ENST00000613899 DHX38Q92620 1227 aaKnown RBP26.11■■□□□ 1.77
FAM228B-208ENST00000613899 BRPF3Q9ULD4 1205 aa26.11■■□□□ 1.77
FAM228B-208ENST00000613899 KLF18A0A0U1RQI7 1052 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 GOLGA8AA7E2F4 631 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 GOLGA8BA8MQT2 603 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 FGD1P98174 961 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 PPP1R18Q6NYC8 613 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 TEX2Q8IWB9 1127 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 GIMAP8Q8ND71 665 aaPredicted RBP26.1■■□□□ 1.77
FAM228B-208ENST00000613899 TET1Q8NFU7 2136 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 GPRASP2Q96D09 838 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 CDHR1Q96JP9 859 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 SLC9A7Q96T83 725 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 USP26Q9BXU7 913 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 EHMT1Q9H9B1 1298 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 SLC28A3Q9HAS3 691 aa26.1■■□□□ 1.77
FAM228B-208ENST00000613899 H3BRB1 525 aa26.09■■□□□ 1.77
FAM228B-208ENST00000613899 hCG_1984214I3L0E3 225 aa26.09■■□□□ 1.77
FAM228B-208ENST00000613899 BAIAP3O94812 1187 aa26.09■■□□□ 1.77
FAM228B-208ENST00000613899 CKBP12277 381 aa26.09■■□□□ 1.77
FAM228B-208ENST00000613899 UBE2SQ16763 222 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms