RNA–Protein interactions for RNA: ENST00000613211.1

CCDC144B-207, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 3

Gene CCDC144B, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-207ENST00000613211 ARL6IP4Q66PJ3 421 aaKnown RBP13.38□□□□□ -0.27
CCDC144B-207ENST00000613211 C4orf32Q8N8J7 132 aa13.38□□□□□ -0.27
CCDC144B-207ENST00000613211 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
CCDC144B-207ENST00000613211 KCNMB3Q9NPA1 279 aa13.38□□□□□ -0.27
CCDC144B-207ENST00000613211 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.38□□□□□ -0.27
CCDC144B-207ENST00000613211 RCOR1Q9UKL0 485 aa13.38□□□□□ -0.27
CCDC144B-207ENST00000613211 RBM47A0AV96 593 aaKnown RBP13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 SPATA31C2B4DYI2 1134 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 WNT7AO00755 349 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 NEMFO60524 1076 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 SNAI1O95863 264 aaPredicted RBP13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 ATP2B1P20020 1258 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 ATP2C1P98194 919 aaPredicted RBP13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 PTGDRQ13258 359 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 MTMR1Q13613 665 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 PTPAQ15257 358 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 SF3A1Q15459 793 aaKnown RBP13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 SLC9C1Q4G0N8 1177 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 PRR16Q569H4 304 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 MFSD14CQ5VZR4 134 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 PLA2G4DQ86XP0 818 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 SLFN12Q8IYM2 578 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 LINC00301Q8NCQ3 95 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 CYP2W1Q8TAV3 490 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 KCNG4Q8TDN1 519 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 SCFD2Q8WU76 684 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 ARMC5Q96C12 935 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 MTMR9Q96QG7 549 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 RIT2Q99578 217 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 SENP7Q9BQF6 1050 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 KATNBL1Q9H079 304 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 KCNH7Q9NS40 1196 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 CNPY2Q9Y2B0 182 aa13.37□□□□□ -0.27
CCDC144B-207ENST00000613211 SLC37A4O43826 429 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 PPP6R2O75170 966 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 BAG4O95429 457 aaKnown RBP13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 OR52Z1P0C646 297 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 NBR1Q14596 966 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 CALCRLQ16602 461 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 GIMAP8Q8ND71 665 aaPredicted RBP13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 SLAIN1Q8ND83 568 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 RAET1EQ8TD07 263 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 SLC5A5Q92911 643 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 FERMT2Q96AC1 680 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 WDR11Q9BZH6 1224 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 TBC1D22BQ9NU19 505 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 FLRT1Q9NZU1 646 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 TFIP11Q9UBB9 837 aaKnown RBP13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 CLIC4Q9Y696 253 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 LCTP09848 1927 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 MGAMO43451 1857 aa13.36□□□□□ -0.27
CCDC144B-207ENST00000613211 CEP290O15078 2479 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 ZNFX1Q9P2E3 1918 aaKnown RBP13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 IPO5O00410 1097 aaKnown RBP13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 SPTLC2O15270 562 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 MSH4O15457 936 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 ADCY3O60266 1144 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 HMGCRP04035 888 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 ACVR2BQ13705 512 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 STK38Q15208 465 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 CCL14Q16627 93 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 CSPP1Q1MSJ5 1256 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 FOXD4L6Q3SYB3 417 aaPredicted RBP13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 IQSEC1Q6DN90 963 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 TAPT1Q6NXT6 567 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 CCDC62Q6P9F0 684 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 FOXD4L3Q6VB84 417 aaPredicted RBP13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 LEO1Q8WVC0 666 aaPredicted RBP13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 TRIB2Q92519 343 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 HAS1Q92839 578 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 GBP4Q96PP9 640 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 ZNF577Q9BSK1 485 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 AGO4Q9HCK5 861 aaKnown RBP13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 HTTP42858 3142 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 CENPFP49454 3210 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 NFASCO94856 1347 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 ELP1O95163 1332 aa13.35□□□□□ -0.27
CCDC144B-207ENST00000613211 NKRFO15226 690 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 ZNF865P0CJ78 1059 aaPredicted RBP13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 ARP10275 920 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 NCLP19338 710 aaKnown RBP13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 CYP2C19P33261 490 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 SEMA3FQ13275 785 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 NEDD9Q14511 834 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 PDIA5Q14554 519 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 TTLL4Q14679 1199 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 MAP3K21Q5TCX8 1036 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 TMEM87AQ8NBN3 555 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 DPF3Q92784 378 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 SPATA32Q96LK8 384 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 FTOQ9C0B1 505 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 TMEM60Q9H2L4 133 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 DDX41Q9UJV9 622 aaKnown RBP13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 SRPRBQ9Y5M8 271 aaKnown RBP13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 MRVI1Q9Y6F6 885 aa13.34□□□□□ -0.27
CCDC144B-207ENST00000613211 SZT2Q5T011 3432 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms