RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 FLT1P17948 1338 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 FAM196BA6NMK8 535 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 WNT7AO00755 349 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 ZNF185O15231 689 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 HEXIM1O94992 359 aaKnown RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 GDF11O95390 407 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 SERPING1P05155 500 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 SNAP25P60880 206 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 EVX2Q03828 476 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 GFPT1Q06210 699 aaPredicted RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 KCTD16Q68DU8 428 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 LRRC45Q96CN5 670 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 BICD1Q96G01 975 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 ANO3Q9BYT9 981 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 METTL14Q9HCE5 456 aaKnown RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 CHD2O14647 1828 aaKnown RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 MYMKA6NI61 221 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 ZBTB5O15062 677 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 CLIC2O15247 247 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 COASYQ13057 564 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 ABCB5Q2M3G0 1257 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 TTC31Q49AM3 519 aaPredicted RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 TTC19Q6DKK2 380 aaPredicted RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 NFRKBQ6P4R8 1299 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 ADGRF4Q8IZF3 695 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 BCAS4Q8TDM0 211 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 KIFC2Q96AC6 838 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 HSD3B7Q9H2F3 369 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 RABGAP1Q9Y3P9 1069 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 PDS5AQ29RF7 1337 aaKnown RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 POTEB3A0JP26 581 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 POTECB2RU33 542 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 GCOM1H8Y6P7 765 aaPredicted RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 FOSP01100 380 aaPredicted RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 MYZAPP0CAP1 466 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 CETN2P41208 172 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 EPHB4P54760 987 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 CDC37Q16543 378 aaPredicted RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 TTBK2Q6IQ55 1244 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 POTEBQ6S5H4 581 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 DHX37Q8IY37 1157 aaKnown RBP9.54□□□□□ -0.88
LIG4-204ENST00000611712 PNKPQ96T60 521 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 CAPS2Q9BXY5 557 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 FUT8Q9BYC5 575 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 COA1Q9GZY4 146 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 IL17RBQ9NRM6 502 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 MTMR4Q9NYA4 1195 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 SPATA31A5Q5VU36 1347 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 SPATA31A7Q8IWB4 1347 aa9.54□□□□□ -0.88
LIG4-204ENST00000611712 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 GOLGA8KD6RF30 607 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 KRIT1O00522 736 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 NCK2O43639 380 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 IBSPP21815 317 aaPredicted RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 PMS1P54277 932 aaKnown RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 ORC2Q13416 577 aaPredicted RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 FAM83BQ5T0W9 1011 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 RSRC2Q7L4I2 434 aaKnown RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 FAM178BQ8IXR5 827 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 SYCE1Q8N0S2 351 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 CCDC155Q8N6L0 562 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 POLD4Q9HCU8 107 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 KBTBD4Q9NVX7 518 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 UTP11Q9Y3A2 253 aaKnown RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 AFPP02771 609 aaKnown RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 CEP85LQ5SZL2 805 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 MCTP2Q6DN12 878 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 TTI2Q6NXR4 508 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 C16orf86Q6ZW13 317 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 FMNL3Q8IVF7 1028 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 PROM2Q8N271 834 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 PLVAPQ9BX97 442 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.53□□□□□ -0.88
LIG4-204ENST00000611712 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 CTTNBP2NLQ9P2B4 639 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 A0A0U1RQJ8 604 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 PRPF6O94906 941 aaKnown RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 TFRCP02786 760 aaKnown RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 MNAT1P51948 309 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 PPP4CP60510 307 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 E2F4Q16254 413 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 MSL1Q68DK7 614 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 CPXCR1Q8N123 301 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 BBXQ8WY36 941 aaPredicted RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 AMFRQ9UKV5 643 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 A6NNZ2 444 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 PDHBP11177 359 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 UBXN2AP68543 259 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 FUT2Q10981 343 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 TUBB8Q3ZCM7 444 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 CCDC25Q86WR0 208 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 DAGLBQ8NCG7 672 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 OSBPL9Q96SU4 736 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 NAP1L3Q99457 506 aaPredicted RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 BHMT2Q9H2M3 363 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 PRDM4Q9UKN5 801 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 RRP15Q9Y3B9 282 aaKnown RBP9.53□□□□□ -0.88
LIG4-204ENST00000611712 DAGLAQ9Y4D2 1042 aa9.53□□□□□ -0.88
LIG4-204ENST00000611712 CNTNAP4Q9C0A0 1308 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms