RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 ABCB5Q2M3G0 1257 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 LRCH2Q5VUJ6 765 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 WHAMMQ8TF30 809 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 TEKT3Q9BXF9 490 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDH1-212ENST00000611625 PVALEFA0A1B0GWK0 134 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 KRT15P19012 456 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 LRRC53A6NM62 1247 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 STX2P32856 288 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 FXR1P51114 621 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDH1-212ENST00000611625 DPYDQ12882 1025 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 GRAPQ13588 217 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 C10orf76Q5T2E6 689 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 FYB2Q5VWT5 728 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 GRAPLQ8TC17 118 aaPredicted RBP13.57□□□□□ -0.24
CDH1-212ENST00000611625 GCNT4Q9P109 453 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 USP21Q9UK80 565 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 THRAP3Q9Y2W1 955 aaKnown RBP13.57□□□□□ -0.24
CDH1-212ENST00000611625 DAAM1Q9Y4D1 1078 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 PNMA6FA0A0J9YX94 578 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 TRIM37O94972 964 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 ZSCAN20P17040 1043 aaPredicted RBP13.57□□□□□ -0.24
CDH1-212ENST00000611625 VPS41P49754 854 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 USP14P54578 494 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 RAD9BQ6WBX8 426 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 MAGOHBQ96A72 148 aaKnown RBP13.57□□□□□ -0.24
CDH1-212ENST00000611625 MAK16Q9BXY0 300 aaKnown RBP13.57□□□□□ -0.24
CDH1-212ENST00000611625 MLXIPQ9HAP2 919 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 EIF3CLB5ME19 914 aaKnown RBP13.57□□□□□ -0.24
CDH1-212ENST00000611625 MYO1CO00159 1063 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 TNNI1P19237 187 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 VSNL1P62760 191 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 IFT88Q13099 833 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 DLGAP5Q15398 846 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 HHATQ5VTY9 493 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 SREK1Q8WXA9 508 aaKnown RBP13.57□□□□□ -0.24
CDH1-212ENST00000611625 CCDC127Q96BQ5 260 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 EIF3CQ99613 913 aaKnown RBP13.57□□□□□ -0.24
CDH1-212ENST00000611625 KANSL2Q9H9L4 492 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 NFU1Q9UMS0 254 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 BBOX1O75936 387 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 GFPT2O94808 682 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 TRPC3Q13507 836 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 KCNB1Q14721 858 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 PTPAQ15257 358 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 ALKBH5Q6P6C2 394 aaKnown RBP13.57□□□□□ -0.24
CDH1-212ENST00000611625 GSPT2Q8IYD1 628 aaKnown RBP13.57□□□□□ -0.24
CDH1-212ENST00000611625 L2HGDHQ9H9P8 463 aa13.57□□□□□ -0.24
CDH1-212ENST00000611625 SEMA3FQ13275 785 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 MESDQ14696 234 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 FAM196AQ6ZSG2 479 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 RASGRP2Q7LDG7 609 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 FAM84BQ96KN1 310 aaPredicted RBP13.56□□□□□ -0.24
CDH1-212ENST00000611625 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.56□□□□□ -0.24
CDH1-212ENST00000611625 COL15A1P39059 1388 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 NR1D1P20393 614 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 GBP1P32455 592 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 GRIN1Q05586 938 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 FAM102BQ5T8I3 360 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 PROM2Q8N271 834 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 GPR101Q96P66 508 aaPredicted RBP13.56□□□□□ -0.24
CDH1-212ENST00000611625 CAPN11Q9UMQ6 739 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 PDE6CP51160 858 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 NLRX1Q86UT6 975 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 LARGE2Q8N3Y3 721 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 CHP1Q99653 195 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 CEP72Q9P209 647 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 ITIH6Q6UXX5 1313 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 USP17L5A8MUK1 530 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 ZBED4O75132 1171 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 ATP1A1P05023 1023 aaKnown RBP13.56□□□□□ -0.24
CDH1-212ENST00000611625 DHX9Q08211 1270 aaKnown RBP13.56□□□□□ -0.24
CDH1-212ENST00000611625 GLE1Q53GS7 698 aaKnown RBP13.56□□□□□ -0.24
CDH1-212ENST00000611625 KRT26Q7Z3Y9 468 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 AGXT2Q9BYV1 514 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 ATP8A1Q9Y2Q0 1164 aa13.56□□□□□ -0.24
CDH1-212ENST00000611625 LRRN2O75325 713 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 TBC1D8O95759 1140 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 XKR9Q5GH70 373 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 SPICE1Q8N0Z3 855 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 SLIT1O75093 1534 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 SERPINB2P05120 415 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 GGCXP38435 758 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 ADCY8P40145 1251 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 CLNS1AP54105 237 aaKnown RBP13.55□□□□□ -0.24
CDH1-212ENST00000611625 C1orf112Q9NSG2 853 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 PALMO75781 387 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 PDE6BP35913 854 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 STAG2Q8N3U4 1231 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 GUF1Q8N442 669 aaKnown RBP13.55□□□□□ -0.24
CDH1-212ENST00000611625 GRK7Q8WTQ7 553 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 VPS37BQ9H9H4 285 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 TXNDC16Q9P2K2 825 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 CD19P15391 556 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms