RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 SEC24CP53992 1094 aa16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 PAK2Q13177 524 aa16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 ENOX2Q16206 610 aaKnown RBP16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 RNF10Q8N5U6 811 aaKnown RBP16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 PACSIN1Q9BY11 444 aa16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 YY1AP1Q9H869 796 aa16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 SAP30BPQ9UHR5 308 aaKnown RBP16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 RBAK-RBAKDNI3L0D1 243 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 NR1D1P20393 614 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 ARID5AQ03989 594 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 LRRC63Q05C16 580 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 EHHADHQ08426 723 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 NAA35Q5VZE5 725 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 ZNF444Q8N0Y2 327 aaPredicted RBP16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 DDX12PQ92771 950 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 C6orf50Q9HD87 102 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 PVALEFA0A1B0GWK0 134 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 RASA1P20936 1047 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 FAM83BQ5T0W9 1011 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 INPP4AQ96PE3 977 aaPredicted RBP16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 MTMR9Q96QG7 549 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 SPZ1Q9BXG8 430 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 FGFBP2Q9BYJ0 223 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 ABCB11O95342 1321 aa16.68■□□□□ 0.26
PCDHGB1-202ENST00000611598 RAD51CO43502 376 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 TDP2O95551 362 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 POLR2FP61218 127 aaKnown RBP16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 GRIK5Q16478 980 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 CALCRLQ16602 461 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 SLC9C1Q4G0N8 1177 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 TGFBRAP1Q8WUH2 860 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 TBC1D5Q92609 795 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 PIGSQ96S52 555 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 TSKSQ9UJT2 592 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 EDIL3O43854 480 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 FGFR1OPO95684 399 aaKnown RBP16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 FNTAP49354 379 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 NAB2Q15742 525 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 SFMBT2Q5VUG0 894 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 B4GALNT4Q76KP1 1039 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 KLHL7Q8IXQ5 586 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 CNPY4Q8N129 248 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 OTUD6BQ8N6M0 293 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 CDK5RAP3Q96JB5 506 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 LSM14BQ9BX40 385 aaKnown RBP16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 EPN3Q9H201 632 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 STK17AQ9UEE5 414 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 ZNF652Q9Y2D9 606 aa16.67■□□□□ 0.26
PCDHGB1-202ENST00000611598 A0A087X0T9 212 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 MEFVO15553 781 aaPredicted RBP16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 FAM228BP0C875 321 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 GNA11P29992 359 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 MNAT1P51948 309 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 RPS8P62241 208 aaKnown RBP16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 MEI1Q5TIA1 1274 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 REXO1Q8N1G1 1221 aaKnown RBP16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 MREGQ8N565 214 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 PRPF38AQ8NAV1 312 aaKnown RBP16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 RAD54LQ92698 747 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 GJA10Q969M2 543 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 UBA5Q9GZZ9 404 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 GOLPH3Q9H4A6 298 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 CEP72Q9P209 647 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 ROBO3Q96MS0 1386 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 PPP1R37O75864 691 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 SERPING1P05155 500 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 HDLBPQ00341 1268 aaKnown RBP16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 ECM1Q16610 540 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 PTGISQ16647 500 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 PTPROQ16827 1216 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 DNAAF5Q86Y56 855 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 MAPKAPK5Q8IW41 473 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 PROCA1Q8NCQ7 364 aaPredicted RBP16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 ZNF473Q8WTR7 871 aaKnown RBP16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 TBC1D7Q9P0N9 293 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 RNF14Q9UBS8 474 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 ADAMTS1Q9UHI8 967 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 PLAAQ9Y263 795 aa16.66■□□□□ 0.26
PCDHGB1-202ENST00000611598 GRID2IPA4D2P6 1211 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 TRAF5O00463 557 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 KIAA0754O94854 1291 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 KIAA0753Q2KHM9 967 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 CCDC40Q4G0X9 1142 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 ZCWPW2Q504Y3 356 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 SWT1Q5T5J6 900 aaKnown RBP16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 MAATS1Q7Z4T9 603 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 SNX29Q8TEQ0 813 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 ATP6V1G3Q96LB4 118 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 CEP89Q96ST8 783 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 ATP6V0A2Q9Y487 856 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 PCDHGC5Q9Y5F6 944 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 COL4A3BPQ9Y5P4 624 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 A6NNZ2 444 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 HPDP32754 393 aaPredicted RBP16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 KCNQ4P56696 695 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 ITGB3BPQ13352 177 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms