RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 LETM2Q2VYF4 491 aa17.73■□□□□ 0.43
RTN1-209ENST00000611068 WLSQ5T9L3 541 aa17.73■□□□□ 0.43
RTN1-209ENST00000611068 IRAK4Q9NWZ3 460 aa17.73■□□□□ 0.43
RTN1-209ENST00000611068 NDUFB10O96000 172 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 USH1GQ495M9 461 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 AP1ARQ63HQ0 302 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 FCHSD1Q86WN1 690 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 PLIN2Q99541 437 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 MYH4Q9Y623 1939 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 A0A087X0B3 334 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 A0A0U1RQJ8 604 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 POTEB2H3BUK9 544 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 ARHGAP6O43182 974 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 MYBL2P10244 700 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 NT5C2P49902 561 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 ATRIPQ8WXE1 791 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 SERTAD1Q9UHV2 236 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 CEP131Q9UPN4 1083 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 SRPRBQ9Y5M8 271 aaKnown RBP17.72■□□□□ 0.43
RTN1-209ENST00000611068 ATRNL1Q5VV63 1379 aa17.72■□□□□ 0.43
RTN1-209ENST00000611068 CCDC148Q8NFR7 591 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 SYMPKQ92797 1274 aaKnown RBP17.71■□□□□ 0.43
RTN1-209ENST00000611068 HSD3B7Q9H2F3 369 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 TMEM60Q9H2L4 133 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 MRPL44Q9H9J2 332 aaKnown RBP17.71■□□□□ 0.43
RTN1-209ENST00000611068 KIF9Q9HAQ2 790 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 SH3GLB2Q9NR46 395 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 HPSEQ9Y251 543 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 PP2D1A8MPX8 630 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 M0R2N6 131 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 AARSP49588 968 aaKnown RBP eCLIP17.71■□□□□ 0.43
RTN1-209ENST00000611068 GDAP1L1Q96MZ0 367 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 BAG1Q99933 345 aaPredicted RBP17.71■□□□□ 0.43
RTN1-209ENST00000611068 ZMYND12Q9H0C1 365 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 VPS33BQ9H267 617 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 SPON1Q9HCB6 807 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 NYAP2Q9P242 653 aa17.71■□□□□ 0.43
RTN1-209ENST00000611068 CCNT1O60563 726 aaKnown RBP17.7■□□□□ 0.42
RTN1-209ENST00000611068 NPM3O75607 178 aaKnown RBP17.7■□□□□ 0.42
RTN1-209ENST00000611068 CENPHQ9H3R5 247 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 C6orf50Q9HD87 102 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
RTN1-209ENST00000611068 HACL1Q9UJ83 578 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 FER1L6Q2WGJ9 1857 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 ZC3H4Q9UPT8 1303 aaKnown RBP17.7■□□□□ 0.42
RTN1-209ENST00000611068 AFMP43652 599 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 PRKG1Q13976 671 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 CEP57Q86XR8 500 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 CCDC26Q8TAB7 109 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 PARD3BQ8TEW8 1205 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 GJA10Q969M2 543 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 KIAA1468Q9P260 1216 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 GRIN2DO15399 1336 aa17.7■□□□□ 0.42
RTN1-209ENST00000611068 USP17L15C9J2P7 530 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 USP17L13C9JLJ4 530 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 USP17L11C9JVI0 530 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 USP17L18D6R9N7 530 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 USP17L22D6RA61 530 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 USP17L17D6RBQ6 530 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 USP17L19D6RCP7 530 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 USP17L20D6RJB6 530 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 FSBPO95073 299 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 USP17L24Q0WX57 530 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 QRICH1Q2TAL8 776 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 ARMC3Q5W041 872 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 USP17L6PQ6QN14 398 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 METTL16Q86W50 562 aaKnown RBP17.69■□□□□ 0.42
RTN1-209ENST00000611068 TBCKQ8TEA7 893 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 KLC4Q9NSK0 619 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 CDC23Q9UJX2 597 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 PNMA6FA0A0J9YX94 578 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 GCKP35557 465 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 UBASH3AP57075 661 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 CEP112Q8N8E3 955 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 NOA1Q8NC60 698 aaKnown RBP17.69■□□□□ 0.42
RTN1-209ENST00000611068 HERC5Q9UII4 1024 aaKnown RBP17.69■□□□□ 0.42
RTN1-209ENST00000611068 ZBTB21Q9ULJ3 1066 aa17.69■□□□□ 0.42
RTN1-209ENST00000611068 GGCXP38435 758 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 TNNI2P48788 182 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 SNX1Q13596 522 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 MTF1Q14872 753 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 CDC37Q16543 378 aaPredicted RBP17.68■□□□□ 0.42
RTN1-209ENST00000611068 FAM83BQ5T0W9 1011 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 GPATCH4Q5T3I0 446 aaKnown RBP17.68■□□□□ 0.42
RTN1-209ENST00000611068 REXO1Q8N1G1 1221 aaKnown RBP17.68■□□□□ 0.42
RTN1-209ENST00000611068 ARMC2Q8NEN0 867 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 LZTFL1Q9NQ48 299 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 HPCAL4Q9UM19 191 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.68■□□□□ 0.42
RTN1-209ENST00000611068 BRCA1P38398 1863 aaKnown RBP17.68■□□□□ 0.42
RTN1-209ENST00000611068 FZD9O00144 591 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 ZBTB5O15062 677 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 EPS15P42566 896 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 NBPF12Q5TAG4 269 aaPredicted RBP17.68■□□□□ 0.42
RTN1-209ENST00000611068 OTUD6BQ8N6M0 293 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 TRPM4Q8TD43 1214 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 MKL1Q969V6 931 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 ZBED3Q96IU2 234 aaPredicted RBP17.68■□□□□ 0.42
RTN1-209ENST00000611068 PCDHA1Q9Y5I3 950 aa17.68■□□□□ 0.42
RTN1-209ENST00000611068 RPS6KL1Q9Y6S9 549 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms