RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 MRPS9P82933 396 aaKnown RBP15.35■□□□□ 0.05
SENP3-209ENST00000610454 FPGSQ05932 587 aa15.35■□□□□ 0.05
SENP3-209ENST00000610454 NEDD9Q14511 834 aa15.35■□□□□ 0.05
SENP3-209ENST00000610454 PFKFB3Q16875 520 aaPredicted RBP15.35■□□□□ 0.05
SENP3-209ENST00000610454 CELF3Q5SZQ8 465 aaKnown RBP15.35■□□□□ 0.05
SENP3-209ENST00000610454 TRIM22Q8IYM9 498 aa15.35■□□□□ 0.05
SENP3-209ENST00000610454 CDHR1Q96JP9 859 aa15.35■□□□□ 0.05
SENP3-209ENST00000610454 INPP4AQ96PE3 977 aaPredicted RBP15.35■□□□□ 0.05
SENP3-209ENST00000610454 KATNAL1Q9BW62 490 aa15.35■□□□□ 0.05
SENP3-209ENST00000610454 ALDH8A1Q9H2A2 487 aaPredicted RBP15.35■□□□□ 0.05
SENP3-209ENST00000610454 RIC8AQ9NPQ8 531 aa15.35■□□□□ 0.05
SENP3-209ENST00000610454 TBX21Q9UL17 535 aa15.35■□□□□ 0.05
SENP3-209ENST00000610454 PCDHA6Q9UN73 950 aa15.35■□□□□ 0.05
SENP3-209ENST00000610454 NOD1Q9Y239 953 aa15.35■□□□□ 0.05
SENP3-209ENST00000610454 PCDHA8Q9Y5H6 950 aa15.35■□□□□ 0.05
SENP3-209ENST00000610454 CD4P01730 458 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 EVCP57679 992 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 TOB2Q14106 344 aaPredicted RBP15.34■□□□□ 0.05
SENP3-209ENST00000610454 NBPF20Q3BBV1 942 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 MYSM1Q5VVJ2 828 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 NFRKBQ6P4R8 1299 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 TMEM199Q8N511 208 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 PHKBQ93100 1093 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 ZNF274Q96GC6 653 aaPredicted RBP15.34■□□□□ 0.05
SENP3-209ENST00000610454 SLC26A6Q9BXS9 759 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 RNF26Q9BY78 433 aaPredicted RBP15.34■□□□□ 0.05
SENP3-209ENST00000610454 PPP1R12CQ9BZL4 782 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 HIPK3Q9H422 1215 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 GRIN2DO15399 1336 aa15.34■□□□□ 0.05
SENP3-209ENST00000610454 PRPF3O43395 683 aaKnown RBP15.33■□□□□ 0.04
SENP3-209ENST00000610454 B4GALT4O60513 344 aa15.33■□□□□ 0.04
SENP3-209ENST00000610454 IFNAR1P17181 557 aa15.33■□□□□ 0.04
SENP3-209ENST00000610454 ICAM3P32942 547 aa15.33■□□□□ 0.04
SENP3-209ENST00000610454 PTPN11Q06124 597 aaPredicted RBP15.33■□□□□ 0.04
SENP3-209ENST00000610454 AP3B2Q13367 1082 aa15.33■□□□□ 0.04
SENP3-209ENST00000610454 PPIGQ13427 754 aaKnown RBP eCLIP15.33■□□□□ 0.04
SENP3-209ENST00000610454 ANKRD1Q15327 319 aa15.33■□□□□ 0.04
SENP3-209ENST00000610454 MFSD5Q6N075 450 aa15.33■□□□□ 0.04
SENP3-209ENST00000610454 GIMAP8Q8ND71 665 aaPredicted RBP15.33■□□□□ 0.04
SENP3-209ENST00000610454 CCDC148Q8NFR7 591 aa15.33■□□□□ 0.04
SENP3-209ENST00000610454 TRPV6Q9H1D0 765 aa15.33■□□□□ 0.04
SENP3-209ENST00000610454 NCOA5Q9HCD5 579 aaKnown RBP15.33■□□□□ 0.04
SENP3-209ENST00000610454 C6orf50Q9HD87 102 aa15.33■□□□□ 0.04
SENP3-209ENST00000610454 SPATA31C2B4DYI2 1134 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 PPFIA4O75335 1185 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 ZNF286BP0CG31 522 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 ITGB8P26012 769 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 GNA11P29992 359 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 SSRP1Q08945 709 aaKnown RBP15.32■□□□□ 0.04
SENP3-209ENST00000610454 STK3Q13188 491 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 MTMR1Q13613 665 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 HSDL1Q3SXM5 330 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 MCTP2Q6DN12 878 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 METTL7BQ6UX53 244 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 C7orf31Q8N865 590 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 BICD2Q8TD16 824 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 GPRASP2Q96D09 838 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 LARP6Q9BRS8 491 aaKnown RBP15.32■□□□□ 0.04
SENP3-209ENST00000610454 ANO3Q9BYT9 981 aa15.32■□□□□ 0.04
SENP3-209ENST00000610454 DOCK5Q9H7D0 1870 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 LAMA3Q16787 3333 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 CDKL5O76039 1030 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 ZNF76P36508 570 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 SP2Q02086 613 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 MFSD10Q14728 455 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 LRIT3Q3SXY7 679 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 CYFIP1Q7L576 1253 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
SENP3-209ENST00000610454 PGBD1Q96JS3 809 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 SENP7Q9BQF6 1050 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 ALG1Q9BT22 464 aa15.31■□□□□ 0.04
SENP3-209ENST00000610454 SLKQ9H2G2 1235 aaPredicted RBP15.31■□□□□ 0.04
SENP3-209ENST00000610454 TRMT13Q9NUP7 481 aaKnown RBP15.31■□□□□ 0.04
SENP3-209ENST00000610454 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 MAFGO15525 162 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 PPFIA3O75145 1194 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 SLC34A2O95436 690 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 F2P00734 622 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 CYP2C18P33260 490 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 PSEN2P49810 448 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 SP4Q02446 784 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 SHHQ15465 462 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 NTRK3Q16288 839 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 KIAA0753Q2KHM9 967 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 CCDC155Q8N6L0 562 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 PPP1R13LQ8WUF5 828 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 RNPC3Q96LT9 517 aaKnown RBP15.3■□□□□ 0.04
SENP3-209ENST00000610454 ZMYND12Q9H0C1 365 aa15.3■□□□□ 0.04
SENP3-209ENST00000610454 DEXIO95424 95 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 CYP2C9P11712 490 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 CSF2RAP15509 400 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 ITGB5P18084 799 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 SEMA3FQ13275 785 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 BFSP2Q13515 415 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 PKN1Q16512 942 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 PTGISQ16647 500 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 JAKMIP3Q5VZ66 844 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 RETREG2Q8NC44 543 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 KAT2BQ92831 832 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms