RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 LIMCH1Q9UPQ0 1083 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 ARVCFO00192 962 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 PPFIA4O75335 1185 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 SREBF1P36956 1147 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 IRX5P78411 483 aaPredicted RBP16.33■□□□□ 0.2
HDDC2-209ENST00000609477 PURAQ00577 322 aaKnown RBP16.33■□□□□ 0.2
HDDC2-209ENST00000609477 RABEP1Q15276 862 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 DGKDQ16760 1214 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 ME3Q16798 604 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 CELF3Q5SZQ8 465 aaKnown RBP16.33■□□□□ 0.2
HDDC2-209ENST00000609477 MYSM1Q5VVJ2 828 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 CXCL17Q6UXB2 119 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 COPS5Q92905 334 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 GTF3C6Q969F1 213 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 ZSCAN31Q96LW9 406 aaPredicted RBP16.33■□□□□ 0.2
HDDC2-209ENST00000609477 MTG1Q9BT17 334 aaPredicted RBP16.33■□□□□ 0.2
HDDC2-209ENST00000609477 ANO3Q9BYT9 981 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 ATP11BQ9Y2G3 1177 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 UBIAD1Q9Y5Z9 338 aa16.33■□□□□ 0.2
HDDC2-209ENST00000609477 MMP3P08254 477 aa16.32■□□□□ 0.2
HDDC2-209ENST00000609477 HOXD8P13378 290 aaPredicted RBP16.32■□□□□ 0.2
HDDC2-209ENST00000609477 ITGA7Q13683 1181 aa16.32■□□□□ 0.2
HDDC2-209ENST00000609477 TRIM60Q495X7 471 aa16.32■□□□□ 0.2
HDDC2-209ENST00000609477 MLXIPQ9HAP2 919 aa16.32■□□□□ 0.2
HDDC2-209ENST00000609477 RTEL1Q9NZ71 1219 aa16.32■□□□□ 0.2
HDDC2-209ENST00000609477 TLR3O15455 904 aaKnown RBP16.31■□□□□ 0.2
HDDC2-209ENST00000609477 GGPS1O95749 300 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 CYP3A4P08684 503 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 UBA1P22314 1058 aaKnown RBP16.31■□□□□ 0.2
HDDC2-209ENST00000609477 NLRP5P59047 1200 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 SP2Q02086 613 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 TLE2Q04725 743 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 PTPN11Q06124 597 aaPredicted RBP16.31■□□□□ 0.2
HDDC2-209ENST00000609477 MTMR1Q13613 665 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 METTL7BQ6UX53 244 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 DAGLBQ8NCG7 672 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 AFG1LQ8WV93 481 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 JADE2Q9NQC1 790 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 SH2B1Q9NRF2 756 aaPredicted RBP16.31■□□□□ 0.2
HDDC2-209ENST00000609477 VPS54Q9P1Q0 977 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
HDDC2-209ENST00000609477 ST18O60284 1047 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 MYL3P08590 195 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 CLTBP09497 229 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 ITGB5P18084 799 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 PTGS1P23219 599 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 ARHGAP4P98171 946 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 CEP55Q53EZ4 464 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 NFRKBQ6P4R8 1299 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 CRYGNQ8WXF5 182 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 SPATA33Q96N06 139 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 MXRA8Q9BRK3 442 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 KATNAL1Q9BW62 490 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 PCDHA4Q9UN74 947 aa16.3■□□□□ 0.2
HDDC2-209ENST00000609477 MEIS1O00470 390 aa16.29■□□□□ 0.2
HDDC2-209ENST00000609477 KIAA0355O15063 1070 aa16.29■□□□□ 0.2
HDDC2-209ENST00000609477 PQBP1O60828 265 aaKnown RBP16.29■□□□□ 0.2
HDDC2-209ENST00000609477 BMP8BP34820 402 aa16.29■□□□□ 0.2
HDDC2-209ENST00000609477 USP11P51784 963 aa16.29■□□□□ 0.2
HDDC2-209ENST00000609477 SEMA3FQ13275 785 aa16.29■□□□□ 0.2
HDDC2-209ENST00000609477 JAKMIP3Q5VZ66 844 aa16.29■□□□□ 0.2
HDDC2-209ENST00000609477 FAM126BQ8IXS8 530 aa16.29■□□□□ 0.2
HDDC2-209ENST00000609477 TBC1D32Q96NH3 1257 aa16.29■□□□□ 0.2
HDDC2-209ENST00000609477 LLPHQ9BRT6 129 aaKnown RBP16.29■□□□□ 0.2
HDDC2-209ENST00000609477 PDLIM7Q9NR12 457 aa16.29■□□□□ 0.2
HDDC2-209ENST00000609477 ORC3Q9UBD5 711 aaPredicted RBP16.29■□□□□ 0.2
HDDC2-209ENST00000609477 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
HDDC2-209ENST00000609477 GRIN2DO15399 1336 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 A0A1W2PPC1 479 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 NOP56O00567 594 aaKnown RBP16.28■□□□□ 0.2
HDDC2-209ENST00000609477 PPFIA3O75145 1194 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 CTDNEP1O95476 244 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 CD4P01730 458 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 SUPT20HL2P0C7V6 817 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 ZNF76P36508 570 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 MCM2P49736 904 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 FAAP100Q0VG06 881 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 HSDL1Q3SXM5 330 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 SESTD1Q86VW0 696 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 BLIDQ8IZY5 108 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 ZFP91Q96JP5 570 aaPredicted RBP16.28■□□□□ 0.2
HDDC2-209ENST00000609477 GDF15Q99988 308 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 LBHD1Q9BQE6 289 aaPredicted RBP16.28■□□□□ 0.2
HDDC2-209ENST00000609477 BACH2Q9BYV9 841 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 KCNH7Q9NS40 1196 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 TMEM260Q9NX78 707 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 ZMYND8Q9ULU4 1186 aaPredicted RBP16.28■□□□□ 0.2
HDDC2-209ENST00000609477 CEP290O15078 2479 aa16.28■□□□□ 0.2
HDDC2-209ENST00000609477 NFASCO94856 1347 aa16.27■□□□□ 0.2
HDDC2-209ENST00000609477 LARGE1O95461 756 aa16.27■□□□□ 0.2
HDDC2-209ENST00000609477 F2P00734 622 aa16.27■□□□□ 0.2
HDDC2-209ENST00000609477 KCNA2P16389 499 aa16.27■□□□□ 0.2
HDDC2-209ENST00000609477 CIITAP33076 1130 aa16.27■□□□□ 0.2
HDDC2-209ENST00000609477 SETQ01105 290 aaPredicted RBP16.27■□□□□ 0.2
HDDC2-209ENST00000609477 CYFIP1Q7L576 1253 aa16.27■□□□□ 0.2
HDDC2-209ENST00000609477 NECAB1Q8N987 351 aa16.27■□□□□ 0.2
HDDC2-209ENST00000609477 NSUN7Q8NE18 718 aaKnown RBP16.27■□□□□ 0.2
HDDC2-209ENST00000609477 PHF20Q9BVI0 1012 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms