RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
CTCFL-213ENST00000607923 HNRNPLLQ8WVV9 542 aaKnown RBP15.26■□□□□ 0.03
CTCFL-213ENST00000607923 HAS1Q92839 578 aa15.26■□□□□ 0.03
CTCFL-213ENST00000607923 MAGEF1Q9HAY2 307 aa15.26■□□□□ 0.03
CTCFL-213ENST00000607923 POLR2FP61218 127 aaKnown RBP15.25■□□□□ 0.03
CTCFL-213ENST00000607923 ZNF543Q08ER8 600 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 TXLNBQ8N3L3 684 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 MS4A14Q96JA4 679 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 ERGIC2Q96RQ1 377 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 TSG101Q99816 390 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 GBP3Q9H0R5 595 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 SIK3Q9Y2K2 1263 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 MYH1P12882 1939 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 SBF2Q86WG5 1849 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 PNMA6FA0A0J9YX94 578 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 TACC1O75410 805 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 SLC1A4P43007 532 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 ASPRV1Q53RT3 343 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 CCDC181Q5TID7 509 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 PAPD7Q5XG87 772 aaKnown RBP15.25■□□□□ 0.03
CTCFL-213ENST00000607923 MYOCDQ8IZQ8 938 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 CUL5Q93034 780 aa15.25■□□□□ 0.03
CTCFL-213ENST00000607923 LSM14BQ9BX40 385 aaKnown RBP15.25■□□□□ 0.03
CTCFL-213ENST00000607923 PACSIN2Q9UNF0 486 aaPredicted RBP15.25■□□□□ 0.03
CTCFL-213ENST00000607923 ANKRD65E5RJM6 399 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 PPEF1O14829 653 aaPredicted RBP15.24■□□□□ 0.03
CTCFL-213ENST00000607923 FOXR1Q6PIV2 292 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 GPBP1Q86WP2 473 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 CCDC170Q8IYT3 715 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 RETREG2Q8NC44 543 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 EHBP1Q8NDI1 1231 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 LRRC1Q9BTT6 524 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 BCAS3Q9H6U6 928 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 FAM204AQ9H8W3 233 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 POTEFA5A3E0 1075 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 GDF11O95390 407 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 POTEIP0CG38 1075 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.032e-7■■□□□ 14.5
CTCFL-213ENST00000607923 RAPGEF1Q13905 1077 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 FAM26FQ5R3K3 315 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 POTEGQ6S5H5 508 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 POTEEQ6S8J3 1075 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 TBC1D22AQ8WUA7 517 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 STK17AQ9UEE5 414 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 PLAGL2Q9UPG8 496 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 SHMT1P34896 483 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 EPS15P42566 896 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 CYP4A11Q02928 519 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 CDC42EP5Q6NZY7 148 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 DMGDHQ9UI17 866 aaKnown RBP15.24■□□□□ 0.03
CTCFL-213ENST00000607923 PCDHA1Q9Y5I3 950 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 MAST2Q6P0Q8 1798 aa15.24■□□□□ 0.03
CTCFL-213ENST00000607923 BBOX1O75936 387 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 TRIM37O94972 964 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 CKAP4Q07065 602 aaKnown RBP15.23■□□□□ 0.03
CTCFL-213ENST00000607923 KCNMA1Q12791 1236 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 PRR16Q569H4 304 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 LRRC55Q6ZSA7 311 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 GUF1Q8N442 669 aaKnown RBP15.23■□□□□ 0.03
CTCFL-213ENST00000607923 RNF40O75150 1001 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 FTCDO95954 541 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 MRPL12P52815 198 aaKnown RBP15.23■□□□□ 0.03
CTCFL-213ENST00000607923 PABPC4Q13310 644 aaKnown RBP eCLIP15.23■□□□□ 0.03
CTCFL-213ENST00000607923 QRICH1Q2TAL8 776 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 DNAJC21Q5F1R6 531 aaKnown RBP15.23■□□□□ 0.03
CTCFL-213ENST00000607923 SH2D4AQ9H788 454 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 RIC8AQ9NPQ8 531 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 BMP2KQ9NSY1 1161 aaPredicted RBP15.23■□□□□ 0.03
CTCFL-213ENST00000607923 GAKO14976 1311 aa15.23■□□□□ 0.03
CTCFL-213ENST00000607923 PVALEFA0A1B0GWK0 134 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 CRY2Q49AN0 593 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 SND1Q7KZF4 910 aaKnown RBP eCLIP15.22■□□□□ 0.03
CTCFL-213ENST00000607923 MTMR8Q96EF0 704 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 ZBTB5O15062 677 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 PLA2G4BP0C869 781 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 ACTN1P12814 892 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 PSMC6P62333 389 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 GABPAQ06546 454 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 MSL1Q68DK7 614 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 SEPT12Q8IYM1 358 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 SPICE1Q8N0Z3 855 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 DNAJC19Q96DA6 116 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 SELENOOQ9BVL4 669 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 GOLPH3Q9H4A6 298 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 SNX12Q9UMY4 172 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 COL4A3BPQ9Y5P4 624 aa15.22■□□□□ 0.03
CTCFL-213ENST00000607923 ESYT2A0FGR8 921 aa15.21■□□□□ 0.03
CTCFL-213ENST00000607923 EEF2P13639 858 aaKnown RBP15.21■□□□□ 0.03
CTCFL-213ENST00000607923 HOXA13P31271 388 aaPredicted RBP15.21■□□□□ 0.03
CTCFL-213ENST00000607923 GGCXP38435 758 aa15.21■□□□□ 0.03
CTCFL-213ENST00000607923 LEKR1Q6ZMV7 388 aa15.21■□□□□ 0.03
CTCFL-213ENST00000607923 FAM133AQ8N9E0 248 aa15.21■□□□□ 0.03
CTCFL-213ENST00000607923 PROCA1Q8NCQ7 364 aaPredicted RBP15.21■□□□□ 0.03
CTCFL-213ENST00000607923 ZNF622Q969S3 477 aaKnown RBP eCLIP15.21■□□□□ 0.033e-23■□□□□ 9.7
CTCFL-213ENST00000607923 SFI1A8K8P3 1242 aa15.21■□□□□ 0.03
CTCFL-213ENST00000607923 MED24O75448 989 aa15.21■□□□□ 0.03
CTCFL-213ENST00000607923 FGFR1OPO95684 399 aaKnown RBP15.21■□□□□ 0.03
CTCFL-213ENST00000607923 HLA-DOAP06340 250 aa15.21■□□□□ 0.03
CTCFL-213ENST00000607923 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.03
CTCFL-213ENST00000607923 TTC19Q6DKK2 380 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms