RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 IWS1Q96ST2 819 aa18.05■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 MRVI1Q9Y6F6 885 aa18.05■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 STXBP3O00186 592 aa18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 HAS3O00219 553 aa18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 CTNNB1P35222 781 aa18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 LTBRP36941 435 aa18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 HNRNPUQ00839 825 aaKnown RBP eCLIP18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 ZMYM1Q5SVZ6 1142 aa18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 BMP8AQ7Z5Y6 402 aa18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 FIBCD1Q8N539 461 aa18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 PPTC7Q8NI37 304 aa18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 EMID1Q96A84 441 aaPredicted RBP18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 TAAR1Q96RJ0 339 aa18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 IFIH1Q9BYX4 1025 aaKnown RBP18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 MAF1Q9H063 256 aa18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 DDX41Q9UJV9 622 aaKnown RBP18.04■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 ORC4O43929 436 aa18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 ZNF543Q08ER8 600 aa18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 MKRN4PQ13434 485 aaPredicted RBP18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 SMAD4Q13485 552 aaKnown RBP18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 IER5LQ5T953 404 aa18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 ARHGEF16Q5VV41 709 aa18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 RMDN3Q96TC7 470 aa18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 C11orf84Q9BUA3 381 aaPredicted RBP18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 LMAN2LQ9H0V9 348 aa18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 IGFLR1Q9H665 355 aa18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 ANAPC4Q9UJX5 808 aa18.03■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 TMEM221A6NGB7 291 aa18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 RBAK-RBAKDNI3L0D1 243 aa18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 M0R296 226 aa18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 DLX2Q07687 328 aaPredicted RBP18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 CTC1Q2NKJ3 1217 aa18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 TRIM67Q6ZTA4 783 aa18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 SERINC5Q86VE9 423 aa18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 MCF2L2Q86YR7 1114 aa18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 ATP6V0A1Q93050 837 aa18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 CD207Q9UJ71 328 aa18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 RWDD3Q9Y3V2 267 aa18.02■□□□□ 0.48
NEDD8-MDP1-204ENST00000605847 C17orf102A2RUQ5 167 aa18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 GFRA3O60609 400 aa18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 PPFIA4O75335 1185 aa18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 EIF3JO75822 258 aaKnown RBP18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 RB1P06400 928 aa18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 FOXK2Q01167 660 aa18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 HYAL1Q12794 435 aa18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 GPATCH4Q5T3I0 446 aaKnown RBP18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 SYTL5Q8TDW5 730 aaPredicted RBP18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 APBB2Q92870 758 aa18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 IL17RAQ96F46 866 aa18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 TCP11L1Q9NUJ3 509 aa18.01■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 ABCB11O95342 1321 aa18■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 CSPG5O95196 566 aa18■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 CTSHP09668 335 aa18■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 EIF2AK2P19525 551 aaKnown RBP18■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 TBC1D5Q92609 795 aa18■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 PPP2R3CQ969Q6 453 aa18■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 SPATA33Q96N06 139 aa18■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 COL4A6Q14031 1691 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 TTC41PQ6P2S7 1318 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 C5orf67F2Z3F1 127 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 SORBS3O60504 671 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 FGRP09769 529 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 BMPR1AP36894 532 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 NDUFV1P49821 464 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 HIC1Q14526 733 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 CDC37Q16543 378 aaPredicted RBP17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 FBXL6Q8N531 539 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 TTC14Q96N46 770 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 IRF2BPLQ9H1B7 796 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 COL20A1Q9P218 1284 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 MICAL3Q7RTP6 2002 aa17.99■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 GRM6O15303 877 aa17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 FOXP2O15409 715 aa17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 CAND2O75155 1236 aa17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 TBX10O75333 385 aa17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 NR3C2P08235 984 aa17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 GOLGA8HP0CJ92 632 aa17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 SNHG28P0DPA3 235 aa17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 TCF15Q12870 199 aa17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 KCNV1Q6PIU1 500 aa17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 UBA5Q9GZZ9 404 aa17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 MRPL11Q9Y3B7 192 aaKnown RBP17.98■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 HOXD8P13378 290 aaPredicted RBP17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 GTF2F1P35269 517 aaKnown RBP eCLIP17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 ZXDAP98168 799 aa17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 HSDL1Q3SXM5 330 aa17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 VPS53Q5VIR6 699 aa17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 MYSM1Q5VVJ2 828 aa17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 ATOH1Q92858 354 aaPredicted RBP17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 CPVLQ9H3G5 476 aa17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 PXMP2Q9NR77 195 aa17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 FAM86C1Q9NVL1 165 aa17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 ZNF318Q5VUA4 2279 aa17.97■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 USP34Q70CQ2 3546 aa17.96■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 H3BRB1 525 aa17.96■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 LINC01565O15544 149 aa17.96■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 TREHO43280 583 aa17.96■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 DHX16O60231 1041 aaKnown RBP17.96■□□□□ 0.47
NEDD8-MDP1-204ENST00000605847 GGPS1O95749 300 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms