RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 MLXIPQ9HAP2 919 aa16.53■□□□□ 0.24
TUBE1-208ENST00000604743 RIC8AQ9NPQ8 531 aa16.53■□□□□ 0.24
TUBE1-208ENST00000604743 TMEM260Q9NX78 707 aa16.53■□□□□ 0.24
TUBE1-208ENST00000604743 CPLX1O14810 134 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 B4GALT4O60513 344 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 STAM2O75886 525 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 FXR1P51114 621 aaKnown RBP eCLIP16.52■□□□□ 0.24
TUBE1-208ENST00000604743 ANAPC15P60006 121 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 NTRK3Q16288 839 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 DGKDQ16760 1214 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 CELF3Q5SZQ8 465 aaKnown RBP16.52■□□□□ 0.24
TUBE1-208ENST00000604743 MYSM1Q5VVJ2 828 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 NLRX1Q86UT6 975 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 TDHQ8IZJ6 230 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 ZNF274Q96GC6 653 aaPredicted RBP16.52■□□□□ 0.24
TUBE1-208ENST00000604743 SPATA33Q96N06 139 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 INPP4AQ96PE3 977 aaPredicted RBP16.52■□□□□ 0.24
TUBE1-208ENST00000604743 BCAS3Q9H6U6 928 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 EHMT1Q9H9B1 1298 aa16.52■□□□□ 0.24
TUBE1-208ENST00000604743 FIBPO43427 364 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 CD4P01730 458 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 TGFB3P10600 412 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 IFNAR1P17181 557 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 SEMA3FQ13275 785 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 PKN1Q16512 942 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 JAKMIP3Q5VZ66 844 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 XRRA1Q6P2D8 792 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 PPTC7Q8NI37 304 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 ALG1Q9BT22 464 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 RNF26Q9BY78 433 aaPredicted RBP16.51■□□□□ 0.23
TUBE1-208ENST00000604743 SEZ6LQ9BYH1 1024 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 ALDH8A1Q9H2A2 487 aaPredicted RBP16.51■□□□□ 0.23
TUBE1-208ENST00000604743 TRMT13Q9NUP7 481 aaKnown RBP16.51■□□□□ 0.23
TUBE1-208ENST00000604743 TBX21Q9UL17 535 aa16.51■□□□□ 0.23
TUBE1-208ENST00000604743 TRIP12Q14669 1992 aaPredicted RBP16.51■□□□□ 0.23
TUBE1-208ENST00000604743 A0A1W2PPC1 479 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 SPATA31C2B4DYI2 1134 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 TIMP1P01033 207 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 ZNF286BP0CG31 522 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 ICAM3P32942 547 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 SP4Q02446 784 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 SSRP1Q08945 709 aaKnown RBP16.5■□□□□ 0.23
TUBE1-208ENST00000604743 NEDD9Q14511 834 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 HSDL1Q3SXM5 330 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 CYFIP1Q7L576 1253 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 TRIM22Q8IYM9 498 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 EMID1Q96A84 441 aaPredicted RBP16.5■□□□□ 0.23
TUBE1-208ENST00000604743 ANO3Q9BYT9 981 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 GLT8D2Q9H1C3 349 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 PKD2L1Q9P0L9 805 aa16.5■□□□□ 0.23
TUBE1-208ENST00000604743 NOP56O00567 594 aaKnown RBP16.49■□□□□ 0.23
TUBE1-208ENST00000604743 FOSP01100 380 aaPredicted RBP16.49■□□□□ 0.23
TUBE1-208ENST00000604743 CYP2C9P11712 490 aa16.49■□□□□ 0.23
TUBE1-208ENST00000604743 CYP2C18P33260 490 aa16.49■□□□□ 0.23
TUBE1-208ENST00000604743 AK2P54819 239 aa16.49■□□□□ 0.23
TUBE1-208ENST00000604743 FPGSQ05932 587 aa16.49■□□□□ 0.23
TUBE1-208ENST00000604743 CCDC12Q8WUD4 166 aaPredicted RBP16.49■□□□□ 0.23
TUBE1-208ENST00000604743 KAT2BQ92831 832 aa16.49■□□□□ 0.23
TUBE1-208ENST00000604743 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
TUBE1-208ENST00000604743 C6orf50Q9HD87 102 aa16.49■□□□□ 0.23
TUBE1-208ENST00000604743 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
TUBE1-208ENST00000604743 TPCN1Q9ULQ1 816 aa16.49■□□□□ 0.23
TUBE1-208ENST00000604743 UMODL1Q5DID0 1318 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 SOX1O00570 391 aaPredicted RBP16.48■□□□□ 0.23
TUBE1-208ENST00000604743 ADAMTS3O15072 1205 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 DTNBO60941 627 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 ITGB5P18084 799 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 PSEN2P49810 448 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 NEK4P51957 841 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 SCRN1Q12765 414 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 SHHQ15465 462 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 C8orf34Q49A92 452 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 C9orf50Q5SZB4 431 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 NFRKBQ6P4R8 1299 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 CPLX2Q6PUV4 134 aaKnown RBP16.48■□□□□ 0.23
TUBE1-208ENST00000604743 GPRASP2Q96D09 838 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 HIPK3Q9H422 1215 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 NOD1Q9Y239 953 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 UBIAD1Q9Y5Z9 338 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 KAT6AQ92794 2004 aa16.48■□□□□ 0.23
TUBE1-208ENST00000604743 ATP9AO75110 1047 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 PPFIA4O75335 1185 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 SUPT20HL2P0C7V6 817 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 GNA11P29992 359 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 ZNF76P36508 570 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 CLK2P49760 499 aaKnown RBP16.47■□□□□ 0.23
TUBE1-208ENST00000604743 EPHB4P54760 987 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 CCL23P55773 120 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 AP3B2Q13367 1082 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 MTMR1Q13613 665 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 MFSD10Q14728 455 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 ANKRD1Q15327 319 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 MFSD5Q6N075 450 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 METTL7BQ6UX53 244 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 TMEM199Q8N511 208 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 CYP2W1Q8TAV3 490 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 RASGRP4Q8TDF6 673 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 LRCH3Q96II8 777 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 CDHR1Q96JP9 859 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 KATNAL1Q9BW62 490 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms