RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 POTEMA6NI47 508 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PP2D1A8MPX8 630 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 BECN2A8MW95 431 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 FOXN1O15353 648 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PSMD10O75832 226 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CETPP11597 493 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 GTF2A2P52657 109 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 HERVK_113P62684 666 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PGM5Q15124 567 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MAP1SQ66K74 1059 aaPredicted RBP13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 B3GNT9Q6UX72 402 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 DLK2Q6UY11 383 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SHCBP1Q8NEM2 672 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 NSUN6Q8TEA1 469 aaKnown RBP13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 LARP4BQ92615 738 aaKnown RBP13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RAD54LQ92698 747 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 GPRASP2Q96D09 838 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 WNK4Q96J92 1243 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CDHR1Q96JP9 859 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MTRQ99707 1265 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PDCD2LQ9BRP1 358 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PANK2Q9BZ23 570 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RRAGCQ9HB90 399 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 TUFT1Q9NNX1 390 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 JADE2Q9NQC1 790 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CYP39A1Q9NYL5 469 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 COL20A1Q9P218 1284 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RHOBTB3O94955 611 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 TAL1P17542 331 aaPredicted RBP13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CCND2P30279 289 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CDC25AP30304 524 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MYL5Q02045 173 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 HS1BP3Q53T59 392 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 LRCH2Q5VUJ6 765 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SLC30A10Q6XR72 485 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SV2BQ7L1I2 683 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 LUZP1Q86V48 1076 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 DHX40Q8IX18 779 aaKnown RBP13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CNKSR2Q8WXI2 1034 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RMDN3Q96TC7 470 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SPATC1LQ9H0A9 340 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 ZCCHC17Q9NP64 241 aaKnown RBP13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 TBC1D22BQ9NU19 505 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 BLOC1S4Q9NUP1 217 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RIPK3Q9Y572 518 aa13.78□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 B4DLN1 442 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 IPO5O00410 1097 aaKnown RBP13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 RPN1P04843 607 aaKnown RBP13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 CCT6AP40227 531 aaKnown RBP13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 AFMP43652 599 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 ARHGEF16Q5VV41 709 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 GPAT2Q6NUI2 795 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 FOXR2Q6PJQ5 311 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 NSMFQ6X4W1 530 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 MOB2Q70IA6 237 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 OTOP1Q7RTM1 612 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 ANKRD23Q86SG2 305 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 VSIG10LQ86VR7 867 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 RDM1Q8NG50 284 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 ENOX1Q8TC92 643 aaKnown RBP13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 ZNF577Q9BSK1 485 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 TEKT3Q9BXF9 490 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 A1CFQ9NQ94 594 aaKnown RBP13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 HOMER2Q9NSB8 354 aa13.77□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 BIN1O00499 593 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 GAS7O60861 476 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 ITGB5P18084 799 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 BMP6P22004 513 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 CDC25BP30305 580 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 GJA5P36382 358 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 GCLCP48506 637 aaPredicted RBP13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 MRPS9P82933 396 aaKnown RBP13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 PSMD2Q13200 908 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 BAATQ14032 418 aaPredicted RBP13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 NLRX1Q86UT6 975 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 GRAMD1CQ8IYS0 662 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 ERCC4Q92889 916 aaPredicted RBP13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 INPP4AQ96PE3 977 aaPredicted RBP13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 TAAR1Q96RJ0 339 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 MPHOSPH6Q99547 160 aaKnown RBP13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 MROH8Q9H579 483 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 ADD3Q9UEY8 706 aaKnown RBP13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 DOCK5Q9H7D0 1870 aa13.76□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 NFASCO94856 1347 aa13.75□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 TRAF5O00463 557 aa13.75□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 KLRC4O43908 158 aa13.75□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 CNMDO75829 334 aa13.75□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 ITGBL1O95965 494 aaPredicted RBP13.75□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 NR3C2P08235 984 aa13.75□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 SFNP31947 248 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms