RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 SYTL5Q8TDW5 730 aaPredicted RBP13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 EMID1Q96A84 441 aaPredicted RBP13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 POP1Q99575 1024 aaKnown RBP13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 USP34Q70CQ2 3546 aa13.82□□□□□ -0.2
PDLIM1P1-201ENST00000604187 ZDBF2Q9HCK1 2354 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 HAS3O00219 553 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 UPP2O95045 317 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 LTBRP36941 435 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 PTPN5P54829 565 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 STXBP2Q15833 593 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 RRP12Q5JTH9 1297 aaKnown RBP13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 SERINC5Q86VE9 423 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 RNF135Q8IUD6 432 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 RGS22Q8NE09 1264 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 NSUN6Q8TEA1 469 aaKnown RBP13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 TAAR1Q96RJ0 339 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 IFIH1Q9BYX4 1025 aaKnown RBP13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 CHMP4BQ9H444 224 aaKnown RBP13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 COL20A1Q9P218 1284 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 DDX41Q9UJV9 622 aaKnown RBP13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 ANAPC4Q9UJX5 808 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 ZNF318Q5VUA4 2279 aa13.81□□□□□ -0.2
PDLIM1P1-201ENST00000604187 NCK2O43639 380 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 ST18O60284 1047 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 SORBS3O60504 671 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 GOLGA8HP0CJ92 632 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 CTNNB1P35222 781 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 DLX2Q07687 328 aaPredicted RBP13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 LAMC2Q13753 1193 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 PLEKHG4Q58EX7 1191 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 IER5LQ5T953 404 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 VPS53Q5VIR6 699 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 SEPT8Q92599 483 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 TBC1D5Q92609 795 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 TOP1MTQ969P6 601 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 RMDN3Q96TC7 470 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 MRVI1Q9Y6F6 885 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 CFAP54Q96N23 3096 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 CACNA1HO95180 2353 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 PTPRSQ13332 1948 aa13.8□□□□□ -0.2
PDLIM1P1-201ENST00000604187 MBTPS2O43462 519 aa13.79□□□□□ -0.2
PDLIM1P1-201ENST00000604187 CSPG5O95196 566 aa13.79□□□□□ -0.2
PDLIM1P1-201ENST00000604187 CTSHP09668 335 aa13.79□□□□□ -0.2
PDLIM1P1-201ENST00000604187 FGRP09769 529 aa13.79□□□□□ -0.2
PDLIM1P1-201ENST00000604187 EIF2AK2P19525 551 aaKnown RBP13.79□□□□□ -0.2
PDLIM1P1-201ENST00000604187 HYAL1Q12794 435 aa13.79□□□□□ -0.2
PDLIM1P1-201ENST00000604187 CTC1Q2NKJ3 1217 aa13.79□□□□□ -0.2
PDLIM1P1-201ENST00000604187 EDAQ92838 391 aa13.79□□□□□ -0.2
PDLIM1P1-201ENST00000604187 IWS1Q96ST2 819 aa13.79□□□□□ -0.2
PDLIM1P1-201ENST00000604187 CPVLQ9H3G5 476 aa13.79□□□□□ -0.2
PDLIM1P1-201ENST00000604187 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 TMEM221A6NGB7 291 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 M0R296 226 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 STXBP3O00186 592 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 GRM6O15303 877 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 TBX10O75333 385 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 EIF3JO75822 258 aaKnown RBP13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 SNHG28P0DPA3 235 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 HOXD8P13378 290 aaPredicted RBP13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 SMAD4Q13485 552 aaKnown RBP13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 CDC37Q16543 378 aaPredicted RBP13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 ARHGEF16Q5VV41 709 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 TRIM67Q6ZTA4 783 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 PI4K2BQ8TCG2 481 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 PBXIP1Q96AQ6 731 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 OSBPL7Q9BZF2 842 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 UBA5Q9GZZ9 404 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 TCP11L1Q9NUJ3 509 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 ABCB11O95342 1321 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 MYH7P12883 1935 aa13.78□□□□□ -0.2
PDLIM1P1-201ENST00000604187 C17orf102A2RUQ5 167 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 HSDL1Q3SXM5 330 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 GPATCH4Q5T3I0 446 aaKnown RBP13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 TTC41PQ6P2S7 1318 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 BMP8AQ7Z5Y6 402 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MCF2L2Q86YR7 1114 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 SUGP1Q8IWZ8 645 aaKnown RBP13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 FIBCD1Q8N539 461 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 OTUD7AQ8TE49 926 aaPredicted RBP13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 ATP6V0A1Q93050 837 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 IL17RAQ96F46 866 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 SPATA33Q96N06 139 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 IGFLR1Q9H665 355 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 CD207Q9UJ71 328 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 SPTBN4Q9H254 2564 aa13.77□□□□□ -0.21
PDLIM1P1-201ENST00000604187 COL4A6Q14031 1691 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 C5orf67F2Z3F1 127 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 LINC01565O15544 149 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 GFRA3O60609 400 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 PPFIA4O75335 1185 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 NR3C2P08235 984 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 GTF2F1P35269 517 aaKnown RBP eCLIP13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 TCF15Q12870 199 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MIER1Q8N108 512 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 PRRX2Q99811 253 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MAF1Q9H063 256 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 LMAN2LQ9H0V9 348 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 DCTPP1Q9H773 170 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 PXMP2Q9NR77 195 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms