RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PPFIA4O75335 1185 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 F2P00734 622 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 ZNF286BP0CG31 522 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 HOXD8P13378 290 aaPredicted RBP20.84■□□□□ 0.93
CCDC12-208ENST00000603885 ICAM3P32942 547 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 PSEN2P49810 448 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 FGD1P98174 961 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 SP2Q02086 613 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 BFSP2Q13515 415 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 PTGISQ16647 500 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 HSDL1Q3SXM5 330 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 PCNX4Q63HM2 1172 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 XRRA1Q6P2D8 792 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 HEATR3Q7Z4Q2 680 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 C7orf31Q8N865 590 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 RETREG2Q8NC44 543 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 GPKOWQ92917 476 aaPredicted RBP eCLIP20.84■□□□□ 0.93
CCDC12-208ENST00000603885 KCNB2Q92953 911 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 BRPF3Q9ULD4 1205 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 KLF18A0A0U1RQI7 1052 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 FIBPO43427 364 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 REC8O95072 547 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 PFKMP08237 780 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 DNAJB2P25686 324 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 HSPA4P34932 840 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 MFSD10Q14728 455 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 GDF6Q6KF10 455 aaPredicted RBP20.83■□□□□ 0.93
CCDC12-208ENST00000603885 OTOP2Q7RTS6 562 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 CCDC155Q8N6L0 562 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 ALG1Q9BT22 464 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 TTYH1Q9H313 450 aaPredicted RBP20.83■□□□□ 0.93
CCDC12-208ENST00000603885 RTEL1Q9NZ71 1219 aa20.83■□□□□ 0.93
CCDC12-208ENST00000603885 CNTNAP5Q8WYK1 1306 aa20.82■□□□□ 0.92
CCDC12-208ENST00000603885 GOLGA8AA7E2F4 631 aa20.82■□□□□ 0.92
CCDC12-208ENST00000603885 GOLGA8BA8MQT2 603 aa20.82■□□□□ 0.92
CCDC12-208ENST00000603885 SPATA31C2B4DYI2 1134 aa20.82■□□□□ 0.92
CCDC12-208ENST00000603885 RFC2P35250 354 aa20.82■□□□□ 0.92
CCDC12-208ENST00000603885 RCAN1P53805 252 aa20.82■□□□□ 0.92
CCDC12-208ENST00000603885 NEDD9Q14511 834 aa20.82■□□□□ 0.92
CCDC12-208ENST00000603885 KIAA0753Q2KHM9 967 aa20.82■□□□□ 0.92
CCDC12-208ENST00000603885 JAKMIP1Q96N16 626 aaKnown RBP20.82■□□□□ 0.92
CCDC12-208ENST00000603885 CXXC1Q9P0U4 656 aaPredicted RBP20.82■□□□□ 0.92
CCDC12-208ENST00000603885 HDAC6Q9UBN7 1215 aa20.82■□□□□ 0.92
CCDC12-208ENST00000603885 GTF2IRD1Q9UHL9 959 aa20.82■□□□□ 0.92
CCDC12-208ENST00000603885 SPDYE3A6NKU9 549 aa20.81■□□□□ 0.92
CCDC12-208ENST00000603885 HAS3O00219 553 aa20.81■□□□□ 0.92
CCDC12-208ENST00000603885 NOP56O00567 594 aaKnown RBP20.81■□□□□ 0.92
CCDC12-208ENST00000603885 NLRX1Q86UT6 975 aa20.81■□□□□ 0.92
CCDC12-208ENST00000603885 CAGE1Q8TC20 777 aa20.81■□□□□ 0.92
CCDC12-208ENST00000603885 TIFAQ96CG3 184 aa20.81■□□□□ 0.92
CCDC12-208ENST00000603885 CDX2Q99626 313 aaPredicted RBP20.81■□□□□ 0.92
CCDC12-208ENST00000603885 NAP1L2Q9ULW6 460 aaPredicted RBP20.81■□□□□ 0.92
CCDC12-208ENST00000603885 SNX14Q9Y5W7 946 aa20.81■□□□□ 0.92
CCDC12-208ENST00000603885 TANC1Q9C0D5 1861 aa20.8■□□□□ 0.92
CCDC12-208ENST00000603885 GRXCR1A8MXD5 290 aa20.8■□□□□ 0.92
CCDC12-208ENST00000603885 IQCF3P0C7M6 154 aa20.8■□□□□ 0.92
CCDC12-208ENST00000603885 SEMA3FQ13275 785 aa20.8■□□□□ 0.92
CCDC12-208ENST00000603885 UBE2SQ16763 222 aa20.8■□□□□ 0.92
CCDC12-208ENST00000603885 WWC2Q6AWC2 1192 aa20.8■□□□□ 0.92
CCDC12-208ENST00000603885 BLOC1S2Q6QNY1 142 aa20.8■□□□□ 0.92
CCDC12-208ENST00000603885 METTL7BQ6UX53 244 aa20.8■□□□□ 0.92
CCDC12-208ENST00000603885 DEFB128Q7Z7B8 93 aa20.8■□□□□ 0.92
CCDC12-208ENST00000603885 VWCEQ96DN2 955 aa20.8■□□□□ 0.92
CCDC12-208ENST00000603885 ZBBXA8MT70 800 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 CPA1P15085 419 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 NAPAP54920 295 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 FUT2Q10981 343 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 PPP1R18Q6NYC8 613 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 Q6ZUG5 572 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 CYFIP1Q7L576 1253 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 SLC17A8Q8NDX2 589 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 AFAP1L1Q8TED9 768 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 CTAGE1Q96RT6 745 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 C16orf70Q9BSU1 422 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 PBX4Q9BYU1 374 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 BCAS3Q9H6U6 928 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 EHMT1Q9H9B1 1298 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 SLC4A7Q9Y6M7 1214 aa20.79■□□□□ 0.92
CCDC12-208ENST00000603885 V9GY48 417 aaPredicted RBP20.79■□□□□ 0.92
CCDC12-208ENST00000603885 SCN5AQ14524 2016 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 hCG_1984214I3L0E3 225 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 ACTN1P12814 892 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 METAP2P50579 478 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCDC12-208ENST00000603885 RAB30Q15771 203 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 TEX2Q8IWB9 1127 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 ZNF713Q8N859 430 aaPredicted RBP20.78■□□□□ 0.92
CCDC12-208ENST00000603885 GIMAP8Q8ND71 665 aaPredicted RBP20.78■□□□□ 0.92
CCDC12-208ENST00000603885 GPRASP2Q96D09 838 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 CDHR1Q96JP9 859 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 SENP7Q9BQF6 1050 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 USP26Q9BXU7 913 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 PCDHA6Q9UN73 950 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 PCDHA8Q9Y5H6 950 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 CDH23Q9H251 3354 aa20.78■□□□□ 0.92
CCDC12-208ENST00000603885 CCDC196A0A1B0GTZ2 297 aa20.77■□□□□ 0.92
CCDC12-208ENST00000603885 H3BRB1 525 aa20.77■□□□□ 0.92
CCDC12-208ENST00000603885 LGALS2P05162 132 aa20.77■□□□□ 0.92
CCDC12-208ENST00000603885 SELPP16109 830 aa20.77■□□□□ 0.92
CCDC12-208ENST00000603885 PSMA5P28066 241 aa20.77■□□□□ 0.92
CCDC12-208ENST00000603885 CDC27P30260 824 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms