RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 FIBPO43427 364 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 SUPT20HL2P0C7V6 817 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 ICAM3P32942 547 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 ADCY7P51828 1080 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 EVCP57679 992 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 SHHQ15465 462 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 TYW1BQ6NUM6 668 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 NFRKBQ6P4R8 1299 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 HIPK3Q9H422 1215 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 EHMT1Q9H9B1 1298 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 RIC8AQ9NPQ8 531 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 TRMT13Q9NUP7 481 aaKnown RBP25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 PCDHA6Q9UN73 950 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 PCDHA8Q9Y5H6 950 aa25.11■■□□□ 1.61
PPFIA3-208ENST00000602726 SPATA31C2B4DYI2 1134 aa25.1■■□□□ 1.61
PPFIA3-208ENST00000602726 EIF5BO60841 1220 aaKnown RBP25.1■■□□□ 1.61
PPFIA3-208ENST00000602726 PDIA3P30101 505 aaKnown RBP25.1■■□□□ 1.61
PPFIA3-208ENST00000602726 TOB2Q14106 344 aaPredicted RBP25.1■■□□□ 1.61
PPFIA3-208ENST00000602726 PFKFB3Q16875 520 aaPredicted RBP25.1■■□□□ 1.61
PPFIA3-208ENST00000602726 NLRX1Q86UT6 975 aa25.1■■□□□ 1.61
PPFIA3-208ENST00000602726 TEX2Q8IWB9 1127 aa25.1■■□□□ 1.61
PPFIA3-208ENST00000602726 TMEM199Q8N511 208 aa25.1■■□□□ 1.61
PPFIA3-208ENST00000602726 LRCH3Q96II8 777 aa25.1■■□□□ 1.61
PPFIA3-208ENST00000602726 SMCO2A6NFE2 343 aa25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 SCG2P13521 617 aa25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 CYP2C18P33260 490 aa25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 CCT2P78371 535 aaKnown RBP25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 AKAP17AQ02040 695 aaKnown RBP25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 PTPN11Q06124 597 aaPredicted RBP25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 NEDD9Q14511 834 aa25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 C9orf50Q5SZB4 431 aa25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 PPP1R13LQ8WUF5 828 aa25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 GLT8D2Q9H1C3 349 aa25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 PDRG1Q9NUG6 133 aa25.09■■□□□ 1.61
PPFIA3-208ENST00000602726 PPFIA4O75335 1185 aa25.08■■□□□ 1.61
PPFIA3-208ENST00000602726 EPHB4P54760 987 aa25.08■■□□□ 1.61
PPFIA3-208ENST00000602726 SEMA3FQ13275 785 aa25.08■■□□□ 1.61
PPFIA3-208ENST00000602726 PPIGQ13427 754 aaKnown RBP eCLIP25.08■■□□□ 1.611e-6■■■■□ 21.5
PPFIA3-208ENST00000602726 HSDL1Q3SXM5 330 aa25.08■■□□□ 1.61
PPFIA3-208ENST00000602726 KAT2BQ92831 832 aa25.08■■□□□ 1.61
PPFIA3-208ENST00000602726 SZT2Q5T011 3432 aa25.08■■□□□ 1.6
PPFIA3-208ENST00000602726 PRPF3O43395 683 aaKnown RBP25.07■■□□□ 1.6
PPFIA3-208ENST00000602726 FOSP01100 380 aaPredicted RBP25.07■■□□□ 1.6
PPFIA3-208ENST00000602726 ZNF286BP0CG31 522 aa25.07■■□□□ 1.6
PPFIA3-208ENST00000602726 PHKBQ93100 1093 aa25.07■■□□□ 1.6
PPFIA3-208ENST00000602726 NOC4LQ9BVI4 516 aaKnown RBP25.07■■□□□ 1.6
PPFIA3-208ENST00000602726 KATNAL1Q9BW62 490 aa25.07■■□□□ 1.6
PPFIA3-208ENST00000602726 NCOA5Q9HCD5 579 aaKnown RBP25.07■■□□□ 1.6
PPFIA3-208ENST00000602726 NOD1Q9Y239 953 aa25.07■■□□□ 1.6
PPFIA3-208ENST00000602726 NOP56O00567 594 aaKnown RBP25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 CYP2C9P11712 490 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 HOXD8P13378 290 aaPredicted RBP25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 CSF2RAP15509 400 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 IFNAR1P17181 557 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 PSEN2P49810 448 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 ANAPC15P60006 121 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 METTL7BQ6UX53 244 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 CYFIP1Q7L576 1253 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 CCDC12Q8WUD4 166 aaPredicted RBP25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 GPRASP2Q96D09 838 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 ZNF274Q96GC6 653 aaPredicted RBP25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 CDHR1Q96JP9 859 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 LARP6Q9BRS8 491 aaKnown RBP25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 SLC26A6Q9BXS9 759 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 BCAS3Q9H6U6 928 aa25.06■■□□□ 1.6
PPFIA3-208ENST00000602726 F2P00734 622 aa25.05■■□□□ 1.6
PPFIA3-208ENST00000602726 NTRK3Q16288 839 aa25.05■■□□□ 1.6
PPFIA3-208ENST00000602726 C7orf31Q8N865 590 aa25.05■■□□□ 1.6
PPFIA3-208ENST00000602726 SENP7Q9BQF6 1050 aa25.05■■□□□ 1.6
PPFIA3-208ENST00000602726 ALG1Q9BT22 464 aa25.05■■□□□ 1.6
PPFIA3-208ENST00000602726 RNF26Q9BY78 433 aaPredicted RBP25.05■■□□□ 1.6
PPFIA3-208ENST00000602726 UMODL1Q5DID0 1318 aa25.05■■□□□ 1.6
PPFIA3-208ENST00000602726 PPFIA3O75145 1194 aa25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 ITGB5P18084 799 aa25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 CCL23P55773 120 aa25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 MFSD10Q14728 455 aa25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 PKN1Q16512 942 aa25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 SESTD1Q86VW0 696 aa25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 GIMAP8Q8ND71 665 aaPredicted RBP25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 PGBD1Q96JS3 809 aa25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 RNPC3Q96LT9 517 aaKnown RBP25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 ANO3Q9BYT9 981 aa25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 UBIAD1Q9Y5Z9 338 aa25.04■■□□□ 1.6
PPFIA3-208ENST00000602726 CPLX1O14810 134 aa25.03■■□□□ 1.6
PPFIA3-208ENST00000602726 AP3B2Q13367 1082 aa25.03■■□□□ 1.6
PPFIA3-208ENST00000602726 MTMR1Q13613 665 aa25.03■■□□□ 1.6
PPFIA3-208ENST00000602726 PTGISQ16647 500 aa25.03■■□□□ 1.6
PPFIA3-208ENST00000602726 KIAA0753Q2KHM9 967 aa25.03■■□□□ 1.6
PPFIA3-208ENST00000602726 GPR153Q6NV75 609 aa25.03■■□□□ 1.6
PPFIA3-208ENST00000602726 C6orf50Q9HD87 102 aa25.03■■□□□ 1.6
PPFIA3-208ENST00000602726 JADE2Q9NQC1 790 aa25.03■■□□□ 1.6
PPFIA3-208ENST00000602726 TMEM260Q9NX78 707 aa25.03■■□□□ 1.6
PPFIA3-208ENST00000602726 ESYT2A0FGR8 921 aa25.02■■□□□ 1.6
PPFIA3-208ENST00000602726 HAS3O00219 553 aa25.02■■□□□ 1.6
PPFIA3-208ENST00000602726 CLK2P49760 499 aaKnown RBP25.02■■□□□ 1.6
PPFIA3-208ENST00000602726 STK3Q13188 491 aa25.02■■□□□ 1.6
PPFIA3-208ENST00000602726 GDF6Q6KF10 455 aaPredicted RBP25.02■■□□□ 1.6
PPFIA3-208ENST00000602726 TRIM22Q8IYM9 498 aa25.02■■□□□ 1.6
PPFIA3-208ENST00000602726 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.02■■□□□ 1.6
PPFIA3-208ENST00000602726 ZMYND12Q9H0C1 365 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms