RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 TGFB3P10600 412 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 CYP2C18P33260 490 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 METAP2P50579 478 aaKnown RBP eCLIP18.36■□□□□ 0.53
SFXN2-208ENST00000602660 FPGSQ05932 587 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 NTRK3Q16288 839 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 CELF3Q5SZQ8 465 aaKnown RBP18.36■□□□□ 0.53
SFXN2-208ENST00000602660 PCNX4Q63HM2 1172 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 MFSD5Q6N075 450 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 NFRKBQ6P4R8 1299 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 KCNV1Q6PIU1 500 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 C16orf59Q7L2K0 433 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 PPTC7Q8NI37 304 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 CUL5Q93034 780 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 CTAGE1Q96RT6 745 aa18.36■□□□□ 0.53
SFXN2-208ENST00000602660 NOC4LQ9BVI4 516 aaKnown RBP18.36■□□□□ 0.53
SFXN2-208ENST00000602660 STAM2O75886 525 aa18.35■□□□□ 0.53
SFXN2-208ENST00000602660 GGPS1O95749 300 aa18.35■□□□□ 0.53
SFXN2-208ENST00000602660 FGD1P98174 961 aa18.35■□□□□ 0.53
SFXN2-208ENST00000602660 LAMC2Q13753 1193 aa18.35■□□□□ 0.53
SFXN2-208ENST00000602660 HSDL1Q3SXM5 330 aa18.35■□□□□ 0.53
SFXN2-208ENST00000602660 DHX37Q8IY37 1157 aaKnown RBP18.35■□□□□ 0.53
SFXN2-208ENST00000602660 VWCEQ96DN2 955 aa18.35■□□□□ 0.53
SFXN2-208ENST00000602660 TM6SF1Q9BZW5 370 aa18.35■□□□□ 0.53
SFXN2-208ENST00000602660 WNT8AQ9H1J5 351 aa18.35■□□□□ 0.53
SFXN2-208ENST00000602660 RTEL1Q9NZ71 1219 aa18.35■□□□□ 0.53
SFXN2-208ENST00000602660 NAP1L2Q9ULW6 460 aaPredicted RBP18.35■□□□□ 0.53
SFXN2-208ENST00000602660 SPATA31C2B4DYI2 1134 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 ADAMTS3O15072 1205 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 SORBS3O60504 671 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 ZNF286BP0CG31 522 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 CSF2RAP15509 400 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 PDIA3P30101 505 aaKnown RBP18.34■□□□□ 0.53
SFXN2-208ENST00000602660 PKN1Q16512 942 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 DGKDQ16760 1214 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 PPP1R18Q6NYC8 613 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 UPF3BQ9BZI7 483 aaKnown RBP18.34■□□□□ 0.53
SFXN2-208ENST00000602660 HIPK3Q9H422 1215 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 RIC8AQ9NPQ8 531 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 TELO2Q9Y4R8 837 aa18.34■□□□□ 0.53
SFXN2-208ENST00000602660 hCG_1984214I3L0E3 225 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 HAS3O00219 553 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 F2P00734 622 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 CYP2C9P11712 490 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 NAPAP54920 295 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 PFKFB3Q16875 520 aaPredicted RBP18.33■□□□□ 0.52
SFXN2-208ENST00000602660 GNPTABQ3T906 1256 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 GPR153Q6NV75 609 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 XRRA1Q6P2D8 792 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 SESTD1Q86VW0 696 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 ZNF713Q8N859 430 aaPredicted RBP18.33■□□□□ 0.52
SFXN2-208ENST00000602660 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.33■□□□□ 0.522e-8■□□□□ 9.1
SFXN2-208ENST00000602660 PCDHA6Q9UN73 950 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 PCDHA8Q9Y5H6 950 aa18.33■□□□□ 0.52
SFXN2-208ENST00000602660 CCDC196A0A1B0GTZ2 297 aa18.32■□□□□ 0.52
SFXN2-208ENST00000602660 FIBPO43427 364 aa18.32■□□□□ 0.52
SFXN2-208ENST00000602660 ITGB5P18084 799 aa18.32■□□□□ 0.52
SFXN2-208ENST00000602660 CLK2P49760 499 aaKnown RBP18.32■□□□□ 0.52
SFXN2-208ENST00000602660 PTPN11Q06124 597 aaPredicted RBP18.32■□□□□ 0.52
SFXN2-208ENST00000602660 FAM47CQ5HY64 1035 aa18.32■□□□□ 0.52
SFXN2-208ENST00000602660 TMEM240Q5SV17 173 aa18.32■□□□□ 0.52
SFXN2-208ENST00000602660 SPATA33Q96N06 139 aa18.32■□□□□ 0.52
SFXN2-208ENST00000602660 C16orf70Q9BSU1 422 aa18.32■□□□□ 0.52
SFXN2-208ENST00000602660 UBIAD1Q9Y5Z9 338 aa18.32■□□□□ 0.52
SFXN2-208ENST00000602660 CYP46A1Q9Y6A2 500 aa18.32■□□□□ 0.52
SFXN2-208ENST00000602660 PRPF3O43395 683 aaKnown RBP18.31■□□□□ 0.52
SFXN2-208ENST00000602660 PPFIA4O75335 1185 aa18.31■□□□□ 0.52
SFXN2-208ENST00000602660 SCG2P13521 617 aa18.31■□□□□ 0.52
SFXN2-208ENST00000602660 PSEN2P49810 448 aa18.31■□□□□ 0.52
SFXN2-208ENST00000602660 PPIGQ13427 754 aaKnown RBP eCLIP18.31■□□□□ 0.529e-8■■■□□ 15.7
SFXN2-208ENST00000602660 GDF6Q6KF10 455 aaPredicted RBP18.31■□□□□ 0.52
SFXN2-208ENST00000602660 METTL7BQ6UX53 244 aa18.31■□□□□ 0.52
SFXN2-208ENST00000602660 TEX2Q8IWB9 1127 aa18.31■□□□□ 0.52
SFXN2-208ENST00000602660 PHKBQ93100 1093 aa18.31■□□□□ 0.52
SFXN2-208ENST00000602660 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
SFXN2-208ENST00000602660 PGBD1Q96JS3 809 aa18.31■□□□□ 0.52
SFXN2-208ENST00000602660 LARP6Q9BRS8 491 aaKnown RBP18.31■□□□□ 0.52
SFXN2-208ENST00000602660 NCOA5Q9HCD5 579 aaKnown RBP18.31■□□□□ 0.52
SFXN2-208ENST00000602660 SMCO2A6NFE2 343 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 SPDYE3A6NKU9 549 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 ATP9AO75110 1047 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 PPFIA3O75145 1194 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 SUPT20HL2P0C7V6 817 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 ACRP10323 421 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 KCNA2P16389 499 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 IFNAR1P17181 557 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 ADCY7P51828 1080 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 CCL23P55773 120 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 CCT2P78371 535 aaKnown RBP18.3■□□□□ 0.52
SFXN2-208ENST00000602660 NEDD9Q14511 834 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 HIC1Q14526 733 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 MFSD10Q14728 455 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 RASIP1Q5U651 963 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 CYFIP1Q7L576 1253 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 TMEM199Q8N511 208 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 GPRASP2Q96D09 838 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 SENP7Q9BQF6 1050 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 TMEM260Q9NX78 707 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 HDAC6Q9UBN7 1215 aa18.3■□□□□ 0.52
SFXN2-208ENST00000602660 ESYT2A0FGR8 921 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms