RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 CLEC4DQ8WXI8 215 aa6.04□□□□□ -1.44
VRK3-226ENST00000602029 FAM227BQ96M60 508 aa6.04□□□□□ -1.44
VRK3-226ENST00000602029 SPATA33Q96N06 139 aa6.04□□□□□ -1.44
VRK3-226ENST00000602029 TAAR1Q96RJ0 339 aa6.04□□□□□ -1.44
VRK3-226ENST00000602029 RAD9AQ99638 391 aa6.04□□□□□ -1.44
VRK3-226ENST00000602029 UBE2ZQ9H832 354 aaPredicted RBP6.04□□□□□ -1.44
VRK3-226ENST00000602029 MLXIPQ9HAP2 919 aa6.04□□□□□ -1.44
VRK3-226ENST00000602029 HELLSQ9NRZ9 838 aa6.04□□□□□ -1.44
VRK3-226ENST00000602029 HDAC6Q9UBN7 1215 aa6.04□□□□□ -1.44
VRK3-226ENST00000602029 FAM50BQ9Y247 325 aa6.04□□□□□ -1.44
VRK3-226ENST00000602029 MRPL11Q9Y3B7 192 aaKnown RBP6.04□□□□□ -1.44
VRK3-226ENST00000602029 VPS13AQ96RL7 3174 aa6.04□□□□□ -1.44
VRK3-226ENST00000602029 CFAP47Q6ZTR5 3102 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 MYH4Q9Y623 1939 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 CCDC171Q6TFL3 1326 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 WDR19Q8NEZ3 1342 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 A0A0D9SFI3 127 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 C17orf102A2RUQ5 167 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 PRR33A8MZF0 331 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 RSPH10B2B2RC85 870 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 EIF5BO60841 1220 aaKnown RBP6.03□□□□□ -1.44
VRK3-226ENST00000602029 FGAP02671 866 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 RSPH10BP0C881 870 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 LAMC2Q13753 1193 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 CLUL1Q15846 466 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 TIGD5Q53EQ6 642 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 CCDC178Q5BJE1 867 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 ZNF618Q5T7W0 954 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 BTNL9Q6UXG8 535 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 FCHSD1Q86WN1 690 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 TBC1D10CQ8IV04 446 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 GJD3Q8N144 294 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 PIBF1Q8WXW3 757 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 SEPT8Q92599 483 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 ATP6V0A1Q93050 837 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 TTC14Q96N46 770 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 C17orf80Q9BSJ5 609 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 IFIH1Q9BYX4 1025 aaKnown RBP6.03□□□□□ -1.44
VRK3-226ENST00000602029 CLDND1Q9NY35 253 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 CTNNA3Q9UI47 895 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 INSL6Q9Y581 213 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 DNAH14Q0VDD8 3507 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 MYH7P12883 1935 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 SCN5AQ14524 2016 aa6.03□□□□□ -1.44
VRK3-226ENST00000602029 NEDD4P46934 1319 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 EMSYQ7Z589 1322 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 RBM47A0AV96 593 aaKnown RBP6.02□□□□□ -1.45
VRK3-226ENST00000602029 ERICH2A1L162 156 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 LINC01553A4QN01 128 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 B4E1Z4 1266 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 NBNO60934 754 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 LGR5O75473 907 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 RGS20O76081 388 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 GJB5O95377 273 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 GGPS1O95749 300 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 NR3C2P08235 984 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 HSPD1P10809 573 aaKnown RBP6.02□□□□□ -1.45
VRK3-226ENST00000602029 ALADP13716 330 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 IL9P15248 144 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 CCND2P30279 289 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 HOXA13P31271 388 aaPredicted RBP6.02□□□□□ -1.45
VRK3-226ENST00000602029 CTNNB1P35222 781 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 ZNF200P98182 395 aaPredicted RBP6.02□□□□□ -1.45
VRK3-226ENST00000602029 ARHGAP1Q07960 439 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 PTK7Q13308 1070 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 GPM6BQ13491 265 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 IMMTQ16891 758 aaKnown RBP6.02□□□□□ -1.45
VRK3-226ENST00000602029 QRICH1Q2TAL8 776 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 ASPRV1Q53RT3 343 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 IFIT1BQ5T764 474 aaKnown RBP6.02□□□□□ -1.45
VRK3-226ENST00000602029 UTP14CQ5TAP6 766 aaKnown RBP6.02□□□□□ -1.45
VRK3-226ENST00000602029 CWC27Q6UX04 472 aaKnown RBP6.02□□□□□ -1.45
VRK3-226ENST00000602029 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.02□□□□□ -1.45
VRK3-226ENST00000602029 ADGRF4Q8IZF3 695 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 SYTL5Q8TDW5 730 aaPredicted RBP6.02□□□□□ -1.45
VRK3-226ENST00000602029 TBC1D5Q92609 795 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 ZFP91Q96JP5 570 aaPredicted RBP6.02□□□□□ -1.45
VRK3-226ENST00000602029 IWS1Q96ST2 819 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 LNPKQ9C0E8 428 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 IGFLR1Q9H665 355 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 SUGCTQ9HAC7 445 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 TCP11L1Q9NUJ3 509 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 GTF2IRD1Q9UHL9 959 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 ANAPC4Q9UJX5 808 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 MCM3APO60318 1980 aa6.02□□□□□ -1.45
VRK3-226ENST00000602029 GREB1LQ9C091 1923 aaPredicted RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 GCOM1H8Y6P7 765 aaPredicted RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 LPXNO60711 386 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 EIF3JO75822 258 aaKnown RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 POLR2MP0CAP2 368 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 GNAT1P11488 350 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 PCP11498 1178 aaKnown RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 POU3F3P20264 500 aaPredicted RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 EDNRBP24530 442 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 PDE1AP54750 535 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 ERVK-21P61565 698 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 ARHGAP4P98171 946 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 TRDNQ13061 729 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 ALX1Q15699 326 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 PUS10Q3MIT2 529 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms