RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 PPP1R13LQ8WUF5 828 aa18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 PGBD1Q96JS3 809 aa18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 GLT8D2Q9H1C3 349 aa18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 RIC8AQ9NPQ8 531 aa18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 PRPF3O43395 683 aaKnown RBP18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 B4GALT4O60513 344 aa18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 TGFB3P10600 412 aa18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 FXR1P51114 621 aaKnown RBP eCLIP18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 FPGSQ05932 587 aa18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 NBPF20Q3BBV1 942 aa18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 CELF3Q5SZQ8 465 aaKnown RBP18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 CPLX2Q6PUV4 134 aaKnown RBP18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 PPTC7Q8NI37 304 aa18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 INPP4AQ96PE3 977 aaPredicted RBP18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 TRPV6Q9H1D0 765 aa18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 TBX21Q9UL17 535 aa18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 NOD1Q9Y239 953 aa18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 GRIN2DO15399 1336 aa18.18■□□□□ 0.5
PPFIA4-213ENST00000601609 MYH7BA7E2Y1 1941 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 TIMP1P01033 207 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 ZNF286BP0CG31 522 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 ITGB8P26012 769 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 SP4Q02446 784 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 SSRP1Q08945 709 aaKnown RBP18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 NEDD9Q14511 834 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 SLC43A3Q8NBI5 491 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 EMID1Q96A84 441 aaPredicted RBP18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 ALG1Q9BT22 464 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 KATNAL1Q9BW62 490 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 RNF26Q9BY78 433 aaPredicted RBP18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 ANO3Q9BYT9 981 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 ALDH8A1Q9H2A2 487 aaPredicted RBP18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 C6orf50Q9HD87 102 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 PKD2L1Q9P0L9 805 aa18.17■□□□□ 0.5
PPFIA4-213ENST00000601609 FOSP01100 380 aaPredicted RBP18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 CD4P01730 458 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 SUPT20HL2P0C7V6 817 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 IFNAR1P17181 557 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 EVCP57679 992 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 SP2Q02086 613 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 AP3B2Q13367 1082 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 MYSM1Q5VVJ2 828 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 JAKMIP3Q5VZ66 844 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 CCDC148Q8NFR7 591 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 ZNF274Q96GC6 653 aaPredicted RBP18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 CDHR1Q96JP9 859 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 SLKQ9H2G2 1235 aaPredicted RBP18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 HIPK3Q9H422 1215 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 TRMT13Q9NUP7 481 aaKnown RBP18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 TMEM260Q9NX78 707 aa18.16■□□□□ 0.5
PPFIA4-213ENST00000601609 DNAH12Q6ZR08 3092 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 SPATA31C2B4DYI2 1134 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 ICAM3P32942 547 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 CYP2C18P33260 490 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 ZNF76P36508 570 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 PSEN2P49810 448 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 MTMR1Q13613 665 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 ANKRD1Q15327 319 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 HSDL1Q3SXM5 330 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 NFRKBQ6P4R8 1299 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 CYFIP1Q7L576 1253 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 TMEM199Q8N511 208 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 C7orf31Q8N865 590 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 GPRASP2Q96D09 838 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 SCN10AQ9Y5Y9 1956 aa18.15■□□□□ 0.5
PPFIA4-213ENST00000601609 SEC24BO95487 1268 aa18.14■□□□□ 0.49
PPFIA4-213ENST00000601609 CYP2C9P11712 490 aa18.14■□□□□ 0.49
PPFIA4-213ENST00000601609 GNA11P29992 359 aa18.14■□□□□ 0.49
PPFIA4-213ENST00000601609 SEMA3FQ13275 785 aa18.14■□□□□ 0.49
PPFIA4-213ENST00000601609 MFSD10Q14728 455 aa18.14■□□□□ 0.49
PPFIA4-213ENST00000601609 NTRK3Q16288 839 aa18.14■□□□□ 0.49
PPFIA4-213ENST00000601609 PKN1Q16512 942 aa18.14■□□□□ 0.49
PPFIA4-213ENST00000601609 METTL7BQ6UX53 244 aa18.14■□□□□ 0.49
PPFIA4-213ENST00000601609 VPS54Q9P1Q0 977 aa18.14■□□□□ 0.49
PPFIA4-213ENST00000601609 ESYT2A0FGR8 921 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 CDKL5O76039 1030 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 AK2P54819 239 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 CCL23P55773 120 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 NLRP5P59047 1200 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 PTPN11Q06124 597 aaPredicted RBP18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 PPIGQ13427 754 aaKnown RBP eCLIP18.13■□□□□ 0.493e-6■■■■□ 24.1
PPFIA4-213ENST00000601609 KIAA0753Q2KHM9 967 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 C9orf50Q5SZB4 431 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 UTP14CQ5TAP6 766 aaKnown RBP18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 MFSD5Q6N075 450 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 TEX2Q8IWB9 1127 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 REXO1Q8N1G1 1221 aaKnown RBP18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 GIMAP8Q8ND71 665 aaPredicted RBP18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 BICD2Q8TD16 824 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 KAT2BQ92831 832 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 UBIAD1Q9Y5Z9 338 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 DOCK5Q9H7D0 1870 aa18.13■□□□□ 0.49
PPFIA4-213ENST00000601609 PPFIA4O75335 1185 aa18.12■□□□□ 0.49
PPFIA4-213ENST00000601609 DEXIO95424 95 aa18.12■□□□□ 0.49
PPFIA4-213ENST00000601609 ITGB5P18084 799 aa18.12■□□□□ 0.49
PPFIA4-213ENST00000601609 SHHQ15465 462 aa18.12■□□□□ 0.49
PPFIA4-213ENST00000601609 PTGISQ16647 500 aa18.12■□□□□ 0.49
PPFIA4-213ENST00000601609 RNPC3Q96LT9 517 aaKnown RBP18.12■□□□□ 0.49
PPFIA4-213ENST00000601609 NOC4LQ9BVI4 516 aaKnown RBP18.12■□□□□ 0.49
PPFIA4-213ENST00000601609 ZMYND12Q9H0C1 365 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms