RNA–Protein interactions for RNA: ENST00000600940.1

USP29-204, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 4

Gene USP29, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-204ENST00000600940 TET1Q8NFU7 2136 aa16.08■□□□□ 0.16
USP29-204ENST00000600940 ADAMTS19Q8TE59 1207 aa16.08■□□□□ 0.16
USP29-204ENST00000600940 KAT2BQ92831 832 aa16.08■□□□□ 0.16
USP29-204ENST00000600940 PIGSQ96S52 555 aa16.08■□□□□ 0.16
USP29-204ENST00000600940 PDCD2LQ9BRP1 358 aa16.08■□□□□ 0.16
USP29-204ENST00000600940 SPTBN5Q9NRC6 3674 aaKnown RBP16.07■□□□□ 0.16
USP29-204ENST00000600940 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
USP29-204ENST00000600940 GGPS1O95749 300 aa16.07■□□□□ 0.16
USP29-204ENST00000600940 CKBP12277 381 aa16.07■□□□□ 0.16
USP29-204ENST00000600940 AAK1Q2M2I8 961 aa16.07■□□□□ 0.16
USP29-204ENST00000600940 CNKSR3Q6P9H4 555 aa16.07■□□□□ 0.16
USP29-204ENST00000600940 CATIPQ7Z7H3 387 aa16.07■□□□□ 0.16
USP29-204ENST00000600940 SAMD3Q8N6K7 520 aa16.07■□□□□ 0.16
USP29-204ENST00000600940 NCOA7Q8NI08 942 aa16.07■□□□□ 0.16
USP29-204ENST00000600940 EMID1Q96A84 441 aaPredicted RBP16.07■□□□□ 0.16
USP29-204ENST00000600940 ZFP91Q96JP5 570 aaPredicted RBP16.07■□□□□ 0.16
USP29-204ENST00000600940 UHRF1Q96T88 793 aaPredicted RBP16.07■□□□□ 0.16
USP29-204ENST00000600940 IL25Q9H293 177 aa16.07■□□□□ 0.16
USP29-204ENST00000600940 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
USP29-204ENST00000600940 NOP56O00567 594 aaKnown RBP16.06■□□□□ 0.16
USP29-204ENST00000600940 OPLAHO14841 1288 aa16.06■□□□□ 0.16
USP29-204ENST00000600940 PPP1R11O60927 126 aaPredicted RBP16.06■□□□□ 0.16
USP29-204ENST00000600940 PPFIA4O75335 1185 aa16.06■□□□□ 0.16
USP29-204ENST00000600940 GSPT1P15170 499 aaKnown RBP16.06■□□□□ 0.16
USP29-204ENST00000600940 PTK7Q13308 1070 aa16.06■□□□□ 0.16
USP29-204ENST00000600940 IKBKEQ14164 716 aa16.06■□□□□ 0.16
USP29-204ENST00000600940 GRM4Q14833 912 aa16.06■□□□□ 0.16
USP29-204ENST00000600940 PGM5Q15124 567 aa16.06■□□□□ 0.16
USP29-204ENST00000600940 CELF3Q5SZQ8 465 aaKnown RBP16.06■□□□□ 0.16
USP29-204ENST00000600940 STOX1Q6ZVD7 989 aa16.06■□□□□ 0.16
USP29-204ENST00000600940 PRRC2BQ5JSZ5 2229 aaKnown RBP16.06■□□□□ 0.16
USP29-204ENST00000600940 PNMA6FA0A0J9YX94 578 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 F2P00734 622 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 CYP21A2P08686 494 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 PDE4AP27815 886 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 WDR5P61964 334 aaKnown RBP16.05■□□□□ 0.16
USP29-204ENST00000600940 PTH1RQ03431 593 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 TAP1Q03518 808 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 GNPTABQ3T906 1256 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 MYSM1Q5VVJ2 828 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 FAM117BQ6P1L5 589 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 TMCO2Q7Z6W1 182 aaPredicted RBP16.05■□□□□ 0.16
USP29-204ENST00000600940 VSIG10LQ86VR7 867 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 DHX38Q92620 1227 aaKnown RBP16.05■□□□□ 0.16
USP29-204ENST00000600940 MTMR8Q96EF0 704 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 MTCH2Q9Y6C9 303 aa16.05■□□□□ 0.16
USP29-204ENST00000600940 TCF20Q9UGU0 1960 aaKnown RBP16.05■□□□□ 0.16
USP29-204ENST00000600940 ABHD14A-ACY1A0A1B0GW23 586 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 E7EWF7 191 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 TGFB3P10600 412 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 CHMLP26374 656 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 THPOP40225 353 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 ZNF200P98182 395 aaPredicted RBP16.04■□□□□ 0.16
USP29-204ENST00000600940 TFF2Q03403 129 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 HSDL1Q3SXM5 330 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 IL31RAQ8NI17 732 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 CUL5Q93034 780 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 RIOX1Q9H6W3 641 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 MTUS1Q9ULD2 1270 aa16.04■□□□□ 0.16
USP29-204ENST00000600940 NBNO60934 754 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 EFCAB14O75071 495 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 RGS20O76081 388 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 UBA1P22314 1058 aaKnown RBP16.03■□□□□ 0.16
USP29-204ENST00000600940 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
USP29-204ENST00000600940 DEFB103AP81534 67 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 GHRHRQ02643 423 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 ZNF618Q5T7W0 954 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 KRT40Q6A162 431 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 CASC1Q6TDU7 716 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 NFXL1Q6ZNB6 911 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 CTCFLQ8NI51 663 aaPredicted RBP16.03■□□□□ 0.16
USP29-204ENST00000600940 SMARCC2Q8TAQ2 1214 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 ATP6V0A1Q93050 837 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 CTAGE1Q96RT6 745 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 SENP2Q9HC62 589 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 RTEL1Q9NZ71 1219 aa16.03■□□□□ 0.16
USP29-204ENST00000600940 SEC63Q9UGP8 760 aaKnown RBP16.03■□□□□ 0.16
USP29-204ENST00000600940 C17orf102A2RUQ5 167 aa16.02■□□□□ 0.16
USP29-204ENST00000600940 EPOPA6NHQ4 379 aa16.02■□□□□ 0.16
USP29-204ENST00000600940 H3BRB1 525 aa16.02■□□□□ 0.16
USP29-204ENST00000600940 HAS3O00219 553 aa16.02■□□□□ 0.16
USP29-204ENST00000600940 KIF5BP33176 963 aa16.02■□□□□ 0.16
USP29-204ENST00000600940 GPKOWQ92917 476 aaPredicted RBP eCLIP16.02■□□□□ 0.16
USP29-204ENST00000600940 RRP36Q96EU6 259 aaKnown RBP16.02■□□□□ 0.16
USP29-204ENST00000600940 RAD9AQ99638 391 aa16.02■□□□□ 0.16
USP29-204ENST00000600940 TUT1Q9H6E5 874 aaKnown RBP16.02■□□□□ 0.16
USP29-204ENST00000600940 TRANK1O15050 2925 aa16.02■□□□□ 0.15
USP29-204ENST00000600940 NCOR1O75376 2440 aa16.02■□□□□ 0.15
USP29-204ENST00000600940 REV3LO60673 3130 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 EMSYQ7Z589 1322 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 LCHNA4D1U4 455 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 RSPH10B2B2RC85 870 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 CYTH3O43739 400 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 LGR5O75473 907 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 ARHGEF15O94989 841 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 CXCL10P02778 98 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 AMHP03971 560 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 RSPH10BP0C881 870 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 SP2Q02086 613 aa16.01■□□□□ 0.15
USP29-204ENST00000600940 SP4Q02446 784 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms