RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 GNA11P29992 359 aa17.4■□□□□ 0.38
LIG1-219ENST00000600055 ICAM3P32942 547 aa17.4■□□□□ 0.38
LIG1-219ENST00000600055 PSMC6P62333 389 aa17.4■□□□□ 0.38
LIG1-219ENST00000600055 PURAQ00577 322 aaKnown RBP17.4■□□□□ 0.38
LIG1-219ENST00000600055 CELF3Q5SZQ8 465 aaKnown RBP17.4■□□□□ 0.38
LIG1-219ENST00000600055 PRPF38BQ5VTL8 546 aaKnown RBP17.4■□□□□ 0.38
LIG1-219ENST00000600055 KCNV1Q6PIU1 500 aa17.4■□□□□ 0.38
LIG1-219ENST00000600055 TEX2Q8IWB9 1127 aa17.4■□□□□ 0.38
LIG1-219ENST00000600055 DHX37Q8IY37 1157 aaKnown RBP17.4■□□□□ 0.38
LIG1-219ENST00000600055 NSUN7Q8NE18 718 aaKnown RBP17.4■□□□□ 0.38
LIG1-219ENST00000600055 GJB4Q9NTQ9 266 aa17.4■□□□□ 0.38
LIG1-219ENST00000600055 ORC3Q9UBD5 711 aaPredicted RBP17.4■□□□□ 0.38
LIG1-219ENST00000600055 GRIN2DO15399 1336 aa17.4■□□□□ 0.38
LIG1-219ENST00000600055 ELP1O95163 1332 aa17.4■□□□□ 0.38
LIG1-219ENST00000600055 STK36Q9NRP7 1315 aa17.4■□□□□ 0.38
LIG1-219ENST00000600055 KIAA1217Q5T5P2 1943 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 FIBPO43427 364 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 MMP3P08254 477 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 TGFB3P10600 412 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 SREBF1P36956 1147 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 TLE2Q04725 743 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 LAMC2Q13753 1193 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 C1orf53Q5VUE5 145 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 MYSM1Q5VVJ2 828 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 NLRX1Q86UT6 975 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 CCDC83Q8IWF9 413 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 REXO1Q8N1G1 1221 aaKnown RBP17.39■□□□□ 0.37
LIG1-219ENST00000600055 CYP2W1Q8TAV3 490 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 PPP1R13LQ8WUF5 828 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 POLR3EQ9NVU0 708 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 KCNJ14Q9UNX9 436 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 DNAH12Q6ZR08 3092 aa17.39■□□□□ 0.37
LIG1-219ENST00000600055 A0A0U1RQG5 324 aaPredicted RBP17.38■□□□□ 0.37
LIG1-219ENST00000600055 ARVCFO00192 962 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 PQBP1O60828 265 aaKnown RBP17.38■□□□□ 0.37
LIG1-219ENST00000600055 ATP9AO75110 1047 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 CABYRO75952 493 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 CDK7P50613 346 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 ARHGAP4P98171 946 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 ITGA7Q13683 1181 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 NPY5RQ15761 445 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 BRDTQ58F21 947 aaPredicted RBP17.38■□□□□ 0.37
LIG1-219ENST00000600055 BICD2Q8TD16 824 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 EMID1Q96A84 441 aaPredicted RBP17.38■□□□□ 0.37
LIG1-219ENST00000600055 GPRASP2Q96D09 838 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 SPATA33Q96N06 139 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 MXRA8Q9BRK3 442 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 MLXIPQ9HAP2 919 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 JADE2Q9NQC1 790 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 PKD2L1Q9P0L9 805 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 PCDHA4Q9UN74 947 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 TELO2Q9Y4R8 837 aa17.38■□□□□ 0.37
LIG1-219ENST00000600055 CD2BP2O95400 341 aaKnown RBP17.37■□□□□ 0.37
LIG1-219ENST00000600055 FOSBP53539 338 aa17.37■□□□□ 0.37
LIG1-219ENST00000600055 HSDL1Q3SXM5 330 aa17.37■□□□□ 0.37
LIG1-219ENST00000600055 CYFIP1Q7L576 1253 aa17.37■□□□□ 0.37
LIG1-219ENST00000600055 SH3RF1Q7Z6J0 888 aa17.37■□□□□ 0.37
LIG1-219ENST00000600055 PPTC7Q8NI37 304 aa17.37■□□□□ 0.37
LIG1-219ENST00000600055 CRYGNQ8WXF5 182 aa17.37■□□□□ 0.37
LIG1-219ENST00000600055 ZSCAN31Q96LW9 406 aaPredicted RBP17.37■□□□□ 0.37
LIG1-219ENST00000600055 MTG1Q9BT17 334 aaPredicted RBP17.37■□□□□ 0.37
LIG1-219ENST00000600055 ALG1Q9BT22 464 aa17.37■□□□□ 0.37
LIG1-219ENST00000600055 ARP10275 920 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 KCNA2P16389 499 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 MTMR1Q13613 665 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 NEDD9Q14511 834 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 CEP55Q53EZ4 464 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 ANKRD33Q7Z3H0 272 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 BLIDQ8IZY5 108 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 SLC43A3Q8NBI5 491 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 PHF20Q9BVI0 1012 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 PRDM5Q9NQX1 630 aaPredicted RBP17.36■□□□□ 0.37
LIG1-219ENST00000600055 PDLIM7Q9NR12 457 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 PDE4DIPQ5VU43 2346 aa17.36■□□□□ 0.37
LIG1-219ENST00000600055 TRIM43BA6NCK2 446 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 FAM86B1E9PN63 330 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 M0R2N6 131 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 EDIL3O43854 480 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 ST18O60284 1047 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 KPNA6O60684 536 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 CYP3A4P08684 503 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 FAM86B2P0C5J1 330 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 ZNF76P36508 570 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 CHMP4BP1P59074 171 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 SP4Q02446 784 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 FAAP100Q0VG06 881 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 DGKDQ16760 1214 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 MCTP2Q6DN12 878 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 METTL7BQ6UX53 244 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 DAGLBQ8NCG7 672 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 KAT2BQ92831 832 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 TRIM43Q96BQ3 446 aaPredicted RBP17.35■□□□□ 0.37
LIG1-219ENST00000600055 SENP7Q9BQF6 1050 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 SH2B1Q9NRF2 756 aaPredicted RBP17.35■□□□□ 0.37
LIG1-219ENST00000600055 KCNH7Q9NS40 1196 aa17.35■□□□□ 0.37
LIG1-219ENST00000600055 MEIS1O00470 390 aa17.34■□□□□ 0.37
LIG1-219ENST00000600055 CLTBP09497 229 aa17.34■□□□□ 0.37
LIG1-219ENST00000600055 ZNF286BP0CG31 522 aa17.34■□□□□ 0.37
LIG1-219ENST00000600055 NBPF20Q3BBV1 942 aa17.34■□□□□ 0.37
LIG1-219ENST00000600055 FAM126BQ8IXS8 530 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms