RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 CELF3Q5SZQ8 465 aaKnown RBP16.47■□□□□ 0.23
IRF3-224ENST00000599680 XRRA1Q6P2D8 792 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 Q6ZUG5 572 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 RPUSD2Q8IZ73 545 aaKnown RBP16.47■□□□□ 0.23
IRF3-224ENST00000599680 CCDC155Q8N6L0 562 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 C7orf31Q8N865 590 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 GPKOWQ92917 476 aaPredicted RBP eCLIP16.47■□□□□ 0.23
IRF3-224ENST00000599680 RTEL1Q9NZ71 1219 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 LAMA2P24043 3122 aaKnown RBP16.47■□□□□ 0.23
IRF3-224ENST00000599680 CCDC196A0A1B0GTZ2 297 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 NOP56O00567 594 aaKnown RBP16.46■□□□□ 0.23
IRF3-224ENST00000599680 FIBPO43427 364 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 ZNF286BP0CG31 522 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 PSEN2P49810 448 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.23
IRF3-224ENST00000599680 RCAN1P53805 252 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 MRPS9P82933 396 aaKnown RBP16.46■□□□□ 0.23
IRF3-224ENST00000599680 APOBRQ0VD83 1088 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 PTGISQ16647 500 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 TMEM240Q5SV17 173 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 MYSM1Q5VVJ2 828 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 PCNX4Q63HM2 1172 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 FAM109BQ6ICB4 259 aaPredicted RBP16.46■□□□□ 0.23
IRF3-224ENST00000599680 ZNF365Q70YC5 407 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 NLRX1Q86UT6 975 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 RETREG2Q8NC44 543 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 KCNB2Q92953 911 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 BRF1Q92994 677 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 ALG1Q9BT22 464 aa16.46■□□□□ 0.23
IRF3-224ENST00000599680 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.45■□□□□ 0.22
IRF3-224ENST00000599680 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.45■□□□□ 0.22
IRF3-224ENST00000599680 hCG_1984214I3L0E3 225 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 PPFIA4O75335 1185 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 FGBP02675 491 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 RPS6KB1P23443 525 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 SP2Q02086 613 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 BFSP2Q13515 415 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 NEDD9Q14511 834 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 MFSD10Q14728 455 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 UBE2SQ16763 222 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 PPP1R18Q6NYC8 613 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 ZNF713Q8N859 430 aaPredicted RBP16.45■□□□□ 0.22
IRF3-224ENST00000599680 SCLYQ96I15 445 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 FAM161BQ96MY7 647 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 INPP4AQ96PE3 977 aaPredicted RBP16.45■□□□□ 0.22
IRF3-224ENST00000599680 WNT8AQ9H1J5 351 aa16.45■□□□□ 0.22
IRF3-224ENST00000599680 EPB41L2O43491 1005 aaKnown RBP16.44■□□□□ 0.22
IRF3-224ENST00000599680 ICAM3P32942 547 aa16.44■□□□□ 0.22
IRF3-224ENST00000599680 KIAA0753Q2KHM9 967 aa16.44■□□□□ 0.22
IRF3-224ENST00000599680 HSDL1Q3SXM5 330 aa16.44■□□□□ 0.22
IRF3-224ENST00000599680 WWC2Q6AWC2 1192 aa16.44■□□□□ 0.22
IRF3-224ENST00000599680 C16orf59Q7L2K0 433 aa16.44■□□□□ 0.22
IRF3-224ENST00000599680 KAT2BQ92831 832 aa16.44■□□□□ 0.22
IRF3-224ENST00000599680 MTMR10Q9NXD2 777 aa16.44■□□□□ 0.22
IRF3-224ENST00000599680 V9GY48 417 aaPredicted RBP16.44■□□□□ 0.22
IRF3-224ENST00000599680 SPATA31C2B4DYI2 1134 aa16.43■□□□□ 0.22
IRF3-224ENST00000599680 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
IRF3-224ENST00000599680 F2P00734 622 aa16.43■□□□□ 0.22
IRF3-224ENST00000599680 CDC27P30260 824 aa16.43■□□□□ 0.22
IRF3-224ENST00000599680 ADCY7P51828 1080 aa16.43■□□□□ 0.22
IRF3-224ENST00000599680 GDF6Q6KF10 455 aaPredicted RBP16.43■□□□□ 0.22
IRF3-224ENST00000599680 CYFIP1Q7L576 1253 aa16.43■□□□□ 0.22
IRF3-224ENST00000599680 SESTD1Q86VW0 696 aa16.43■□□□□ 0.22
IRF3-224ENST00000599680 GIMAP8Q8ND71 665 aaPredicted RBP16.43■□□□□ 0.22
IRF3-224ENST00000599680 CDHR1Q96JP9 859 aa16.43■□□□□ 0.22
IRF3-224ENST00000599680 PCDHA6Q9UN73 950 aa16.43■□□□□ 0.22
IRF3-224ENST00000599680 PCDHA8Q9Y5H6 950 aa16.43■□□□□ 0.22
IRF3-224ENST00000599680 ZBBXA8MT70 800 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 PFKMP08237 780 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 HOXD8P13378 290 aaPredicted RBP16.42■□□□□ 0.22
IRF3-224ENST00000599680 RFC2P35250 354 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 AKAP17AQ02040 695 aaKnown RBP16.42■□□□□ 0.22
IRF3-224ENST00000599680 SP4Q02446 784 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 METTL7BQ6UX53 244 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 OTOP2Q7RTS6 562 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 DEFB128Q7Z7B8 93 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 CAGE1Q8TC20 777 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 GLT8D2Q9H1C3 349 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 RIC8AQ9NPQ8 531 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 HDAC6Q9UBN7 1215 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 GTF2IRD1Q9UHL9 959 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 CYP46A1Q9Y6A2 500 aa16.42■□□□□ 0.22
IRF3-224ENST00000599680 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
IRF3-224ENST00000599680 FOSP01100 380 aaPredicted RBP16.41■□□□□ 0.22
IRF3-224ENST00000599680 ACTN1P12814 892 aa16.41■□□□□ 0.22
IRF3-224ENST00000599680 ADD1P35611 737 aaKnown RBP16.41■□□□□ 0.22
IRF3-224ENST00000599680 FUT2Q10981 343 aa16.41■□□□□ 0.22
IRF3-224ENST00000599680 RUFY3Q7L099 469 aa16.41■□□□□ 0.22
IRF3-224ENST00000599680 TEX2Q8IWB9 1127 aa16.41■□□□□ 0.22
IRF3-224ENST00000599680 TET1Q8NFU7 2136 aa16.41■□□□□ 0.22
IRF3-224ENST00000599680 CCDC12Q8WUD4 166 aaPredicted RBP16.41■□□□□ 0.22
IRF3-224ENST00000599680 HERVK_113Q902F9 699 aa16.41■□□□□ 0.22
IRF3-224ENST00000599680 SENP7Q9BQF6 1050 aa16.41■□□□□ 0.22
IRF3-224ENST00000599680 USP26Q9BXU7 913 aa16.41■□□□□ 0.22
IRF3-224ENST00000599680 FTOQ9C0B1 505 aaKnown RBP eCLIP16.41■□□□□ 0.22
IRF3-224ENST00000599680 BARHL2Q9NY43 387 aa16.41■□□□□ 0.22
IRF3-224ENST00000599680 ZNF215Q9UL58 517 aaPredicted RBP16.41■□□□□ 0.22
IRF3-224ENST00000599680 TMEM265A0A087WTH1 108 aa16.4■□□□□ 0.22
IRF3-224ENST00000599680 H3BRB1 525 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms