RNA–Protein interactions for RNA: ENST00000599564.5

GRAMD1A-211, Transcript of GRAM domain containing 1A, humanhuman

TSL 5 BASIC

Gene GRAMD1A, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-211ENST00000599564 CCNHP51946 323 aaPredicted RBP18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 TRIM28Q13263 835 aaKnown RBP18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 PDXDC1Q6P996 788 aa18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 CABP7Q86V35 215 aa18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 PNMA8AQ86V59 439 aaPredicted RBP18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 CCDC50Q8IVM0 306 aa18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 USP38Q8NB14 1042 aa18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 ATP6V0A4Q9HBG4 840 aa18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 PPP1R12AO14974 1030 aaPredicted RBP18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 BUB1BO60566 1050 aaPredicted RBP18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 CLTAP09496 248 aa18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 XRCC4Q13426 336 aa18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 CCT6BQ92526 530 aa18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 TBC1D5Q92609 795 aa18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 TATDN2Q93075 761 aa18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 DDX47Q9H0S4 455 aaKnown RBP18.46■□□□□ 0.55
GRAMD1A-211ENST00000599564 MAGEB6P1A0A0J9YX57 407 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 RTN2O75298 545 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 TNNC1P63316 161 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 DYMQ7RTS9 669 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 CCDC47Q96A33 483 aaKnown RBP18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 ISCUQ9H1K1 167 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 TSKSQ9UJT2 592 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 MGRN1O60291 552 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 TLR2O60603 784 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 SLC8A1P32418 973 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 KIAA0753Q2KHM9 967 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 KRT71Q3SY84 523 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 MEI1Q5TIA1 1274 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 RNF10Q8N5U6 811 aaKnown RBP18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 NSMCE1Q8WV22 266 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 TNS3Q68CZ2 1445 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 F8W031 263 aaPredicted RBP18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 CEP104O60308 925 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 TRHP20396 242 aaPredicted RBP18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 LRRC41Q15345 812 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 GLIS3Q8NEA6 775 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 RNF14Q9UBS8 474 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 ADAMTS1Q9UHI8 967 aa18.45■□□□□ 0.54
GRAMD1A-211ENST00000599564 MAN2A1Q16706 1144 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 STAG2Q8N3U4 1231 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 FAM170AA1A519 330 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 DAPK3O43293 454 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 CALM1P0DP23 149 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 CALM2P0DP24 149 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 CALM3P0DP25 149 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 PEX19P40855 299 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 LRIG3Q6UXM1 1119 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 TBC1D1Q86TI0 1168 aaPredicted RBP18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 FMNL3Q8IVF7 1028 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 C1orf131Q8NDD1 294 aaKnown RBP18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 TRIM31Q9BZY9 425 aa18.44■□□□□ 0.54
GRAMD1A-211ENST00000599564 A0A087X0T9 212 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 GRID2IPA4D2P6 1211 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 FAM228BP0C875 321 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 DRD4P21917 467 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 POLR2FP61218 127 aaKnown RBP18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 KCNMA1Q12791 1236 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 NAB2Q15742 525 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 GIGYF2Q6Y7W6 1299 aaKnown RBP18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 CCSER1Q9C0I3 900 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 GGT7Q9UJ14 662 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 FLT1P17948 1338 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 BAZ2AQ9UIF9 1905 aaKnown RBP18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 SRRM3A6NNA2 597 aaPredicted RBP18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 USP17L12C9JPN9 530 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 USP17L21D6R901 530 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 DDAH1O94760 285 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 TECP42680 631 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 SLC9C1Q4G0N8 1177 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 FAM133BQ5BKY9 247 aaKnown RBP18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 RUFY4Q6ZNE9 571 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 CCDC84Q86UT8 332 aaPredicted RBP18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 TAF4BQ92750 862 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 CUL5Q93034 780 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 DPH5Q9H2P9 285 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 AMACRQ9UHK6 382 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 PCDHA4Q9UN74 947 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 KCPQ6ZWJ8 1503 aa18.43■□□□□ 0.54
GRAMD1A-211ENST00000599564 C5orf60A6NFR6 353 aa18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 WTIPA6NIX2 430 aaPredicted RBP18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 CTNND1O60716 968 aaKnown RBP18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 LACTB2Q53H82 288 aaPredicted RBP18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 ZCRB1Q8TBF4 217 aaKnown RBP18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 LRRC45Q96CN5 670 aa18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 RSRC1Q96IZ7 334 aaKnown RBP18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 PNMA2Q9UL42 364 aa18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 SART1O43290 800 aaKnown RBP18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 TRIM37O94972 964 aa18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 MYBP10242 640 aa18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 ITGA4P13612 1032 aa18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 MAGEC3Q8TD91 643 aa18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 CELF4Q9BZC1 486 aaKnown RBP18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 TCP11L1Q9NUJ3 509 aa18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.42■□□□□ 0.541e-7■■■■□ 23
GRAMD1A-211ENST00000599564 PCDHA6Q9UN73 950 aa18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 PCDHA8Q9Y5H6 950 aa18.42■□□□□ 0.54
GRAMD1A-211ENST00000599564 SMIM23A6NLE4 172 aa18.41■□□□□ 0.54
GRAMD1A-211ENST00000599564 ORC4O43929 436 aa18.41■□□□□ 0.54
GRAMD1A-211ENST00000599564 MYL1P05976 194 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms