RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 HSDL1Q3SXM5 330 aa22.37■■□□□ 1.17
IRF3-222ENST00000599144 HOMER1Q86YM7 354 aa22.37■■□□□ 1.17
IRF3-222ENST00000599144 PPTC7Q8NI37 304 aa22.37■■□□□ 1.17
IRF3-222ENST00000599144 EMID1Q96A84 441 aaPredicted RBP22.37■■□□□ 1.17
IRF3-222ENST00000599144 UBAC1Q9BSL1 405 aa22.37■■□□□ 1.17
IRF3-222ENST00000599144 AMNQ9BXJ7 453 aa22.37■■□□□ 1.17
IRF3-222ENST00000599144 OSBPL7Q9BZF2 842 aa22.37■■□□□ 1.17
IRF3-222ENST00000599144 PTPRSQ13332 1948 aa22.36■■□□□ 1.17
IRF3-222ENST00000599144 GGPS1O95749 300 aa22.36■■□□□ 1.17
IRF3-222ENST00000599144 IFIT1BQ5T764 474 aaKnown RBP22.36■■□□□ 1.17
IRF3-222ENST00000599144 SPATA33Q96N06 139 aa22.36■■□□□ 1.17
IRF3-222ENST00000599144 KATNAL1Q9BW62 490 aa22.36■■□□□ 1.17
IRF3-222ENST00000599144 CD320Q9NPF0 282 aa22.36■■□□□ 1.17
IRF3-222ENST00000599144 COL4A4P53420 1690 aaPredicted RBP22.36■■□□□ 1.17
IRF3-222ENST00000599144 ABHD14A-ACY1A0A1B0GW23 586 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 KLRF2D3W0D1 207 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 NUCB1Q02818 461 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 MYSM1Q5VVJ2 828 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 DBF4BQ8NFT6 615 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 RAD9AQ99638 391 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 C17orf80Q9BSJ5 609 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 DSCC1Q9BVC3 393 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 C1QTNF1Q9BXJ1 281 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 SENP2Q9HC62 589 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 MAD2L2Q9UI95 211 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 PCDHA1Q9Y5I3 950 aa22.35■■□□□ 1.17
IRF3-222ENST00000599144 FAM86C2PA6NEL3 165 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 UBA1P22314 1058 aaKnown RBP22.34■■□□□ 1.17
IRF3-222ENST00000599144 THPOP40225 353 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 ERVK-21P61565 698 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 IKBKEQ14164 716 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 PGM5Q15124 567 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 SEC23AQ15436 765 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 CELF3Q5SZQ8 465 aaKnown RBP22.34■■□□□ 1.17
IRF3-222ENST00000599144 FCHSD1Q86WN1 690 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 TGS1Q96RS0 853 aaKnown RBP22.34■■□□□ 1.17
IRF3-222ENST00000599144 PIGSQ96S52 555 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 LRFN3Q9BTN0 628 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 KRT23Q9C075 422 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 RWDD1Q9H446 243 aaPredicted RBP22.34■■□□□ 1.17
IRF3-222ENST00000599144 OSBPL3Q9H4L5 887 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 TELO2Q9Y4R8 837 aa22.34■■□□□ 1.17
IRF3-222ENST00000599144 ZBTB5O15062 677 aa22.33■■□□□ 1.17
IRF3-222ENST00000599144 LGR5O75473 907 aa22.33■■□□□ 1.17
IRF3-222ENST00000599144 PLA2G5P39877 138 aa22.33■■□□□ 1.17
IRF3-222ENST00000599144 MTMR8Q96EF0 704 aa22.33■■□□□ 1.17
IRF3-222ENST00000599144 C16orf70Q9BSU1 422 aa22.33■■□□□ 1.17
IRF3-222ENST00000599144 MAF1Q9H063 256 aa22.33■■□□□ 1.17
IRF3-222ENST00000599144 CTSHP09668 335 aa22.32■■□□□ 1.16
IRF3-222ENST00000599144 HOXD8P13378 290 aaPredicted RBP22.32■■□□□ 1.16
IRF3-222ENST00000599144 STOX1Q6ZVD7 989 aa22.32■■□□□ 1.16
IRF3-222ENST00000599144 VSIG10LQ86VR7 867 aa22.32■■□□□ 1.16
IRF3-222ENST00000599144 MYOCDQ8IZQ8 938 aa22.32■■□□□ 1.16
IRF3-222ENST00000599144 PIBF1Q8WXW3 757 aa22.32■■□□□ 1.16
IRF3-222ENST00000599144 FAM122AQ96E09 287 aa22.32■■□□□ 1.16
IRF3-222ENST00000599144 TAF6LQ9Y6J9 622 aa22.32■■□□□ 1.16
IRF3-222ENST00000599144 TRIP12Q14669 1992 aaPredicted RBP22.31■■□□□ 1.16
IRF3-222ENST00000599144 PALM3A6NDB9 673 aaPredicted RBP22.31■■□□□ 1.16
IRF3-222ENST00000599144 RSPH10B2B2RC85 870 aa22.31■■□□□ 1.16
IRF3-222ENST00000599144 PARNO95453 639 aaKnown RBP22.31■■□□□ 1.16
IRF3-222ENST00000599144 RSPH10BP0C881 870 aa22.31■■□□□ 1.16
IRF3-222ENST00000599144 GHRHRQ02643 423 aa22.31■■□□□ 1.16
IRF3-222ENST00000599144 SERINC5Q86VE9 423 aa22.31■■□□□ 1.16
IRF3-222ENST00000599144 EXOC6Q8TAG9 804 aa22.31■■□□□ 1.16
IRF3-222ENST00000599144 UBE2ZQ9H832 354 aaPredicted RBP22.31■■□□□ 1.16
IRF3-222ENST00000599144 CTNNA3Q9UI47 895 aa22.31■■□□□ 1.16
IRF3-222ENST00000599144 TREHO43280 583 aa22.3■■□□□ 1.16
IRF3-222ENST00000599144 PPFIA4O75335 1185 aa22.3■■□□□ 1.16
IRF3-222ENST00000599144 CNNM2Q9H8M5 875 aa22.3■■□□□ 1.16
IRF3-222ENST00000599144 MLXIPQ9HAP2 919 aa22.3■■□□□ 1.16
IRF3-222ENST00000599144 C11orf16Q9NQ32 467 aa22.3■■□□□ 1.16
IRF3-222ENST00000599144 LAMA4Q16363 1823 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 C17orf102A2RUQ5 167 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 GCOM1H8Y6P7 765 aaPredicted RBP22.29■■□□□ 1.16
IRF3-222ENST00000599144 CYTH3O43739 400 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 POLR2MP0CAP2 368 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 SMIM10L2AP0DMW4 78 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 SMIM10L2BP0DMW5 78 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 KCNA5P22460 613 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 CCND2P30279 289 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 MKRN4PQ13434 485 aaPredicted RBP22.29■■□□□ 1.16
IRF3-222ENST00000599144 TRIM50Q86XT4 487 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 FBXO22Q8NEZ5 403 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 ATP6V0A1Q93050 837 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 RTEL1Q9NZ71 1219 aa22.29■■□□□ 1.16
IRF3-222ENST00000599144 SUPT16HQ9Y5B9 1047 aaKnown RBP22.29■■□□□ 1.16
IRF3-222ENST00000599144 HIP1O00291 1037 aa22.28■■□□□ 1.16
IRF3-222ENST00000599144 UPP2O95045 317 aa22.28■■□□□ 1.16
IRF3-222ENST00000599144 AMHP03971 560 aa22.28■■□□□ 1.16
IRF3-222ENST00000599144 LGALS2P05162 132 aa22.28■■□□□ 1.16
IRF3-222ENST00000599144 NT5C2P49902 561 aa22.28■■□□□ 1.16
IRF3-222ENST00000599144 GRM4Q14833 912 aa22.28■■□□□ 1.16
IRF3-222ENST00000599144 RNPEPQ9H4A4 650 aa22.28■■□□□ 1.16
IRF3-222ENST00000599144 LMCD1Q9NZU5 365 aa22.28■■□□□ 1.16
IRF3-222ENST00000599144 BDP1A6H8Y1 2624 aa22.27■■□□□ 1.16
IRF3-222ENST00000599144 TRANK1O15050 2925 aa22.27■■□□□ 1.16
IRF3-222ENST00000599144 H3BRB1 525 aa22.27■■□□□ 1.16
IRF3-222ENST00000599144 EFCAB14O75071 495 aa22.27■■□□□ 1.16
IRF3-222ENST00000599144 IL9P15248 144 aa22.27■■□□□ 1.16
IRF3-222ENST00000599144 MRPS9P82933 396 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms