RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 HSDL1Q3SXM5 330 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 CELF3Q5SZQ8 465 aaKnown RBP15.86■□□□□ 0.13
SCAF1-203ENST00000598359 RASIP1Q5U651 963 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 MYSM1Q5VVJ2 828 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 GDF6Q6KF10 455 aaPredicted RBP15.86■□□□□ 0.13
SCAF1-203ENST00000598359 PSRC1Q6PGN9 363 aaPredicted RBP15.86■□□□□ 0.13
SCAF1-203ENST00000598359 DHX32Q7L7V1 743 aaKnown RBP15.86■□□□□ 0.13
SCAF1-203ENST00000598359 OTOP2Q7RTS6 562 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 PPTC7Q8NI37 304 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 SMARCC2Q8TAQ2 1214 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 EMID1Q96A84 441 aaPredicted RBP15.86■□□□□ 0.13
SCAF1-203ENST00000598359 ALG1Q9BT22 464 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 FRMPD4Q14CM0 1322 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.85■□□□□ 0.13
SCAF1-203ENST00000598359 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.85■□□□□ 0.13
SCAF1-203ENST00000598359 FGBP02675 491 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 PSEN2P49810 448 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 SEMA3FQ13275 785 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 TSGA10IPQ3SY00 556 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 SYNE3Q6ZMZ3 975 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 HEATR3Q7Z4Q2 680 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 DEFB128Q7Z7B8 93 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 CUL5Q93034 780 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 SPATA33Q96N06 139 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 CTAGE1Q96RT6 745 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 NAP1L2Q9ULW6 460 aaPredicted RBP15.85■□□□□ 0.13
SCAF1-203ENST00000598359 NOD1Q9Y239 953 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 TELO2Q9Y4R8 837 aa15.85■□□□□ 0.13
SCAF1-203ENST00000598359 KLF18A0A0U1RQI7 1052 aa15.84■□□□□ 0.13
SCAF1-203ENST00000598359 DNAJB2P25686 324 aa15.84■□□□□ 0.13
SCAF1-203ENST00000598359 MFSD10Q14728 455 aa15.84■□□□□ 0.13
SCAF1-203ENST00000598359 PTGISQ16647 500 aa15.84■□□□□ 0.13
SCAF1-203ENST00000598359 HERVK_113Q902F9 699 aa15.84■□□□□ 0.13
SCAF1-203ENST00000598359 PSTPIP2Q9H939 334 aa15.84■□□□□ 0.13
SCAF1-203ENST00000598359 HDAC6Q9UBN7 1215 aa15.84■□□□□ 0.13
SCAF1-203ENST00000598359 SNX14Q9Y5W7 946 aa15.84■□□□□ 0.13
SCAF1-203ENST00000598359 CNTNAP5Q8WYK1 1306 aa15.84■□□□□ 0.13
SCAF1-203ENST00000598359 NCOR1O75376 2440 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 GOLGA8AA7E2F4 631 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 GOLGA8BA8MQT2 603 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 PIK3CDO00329 1044 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 ZBTB43O43298 467 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 ZNF200P98182 395 aaPredicted RBP15.83■□□□□ 0.12
SCAF1-203ENST00000598359 PTPN11Q06124 597 aaPredicted RBP15.83■□□□□ 0.12
SCAF1-203ENST00000598359 HIC1Q14526 733 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 KRT32Q14532 448 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 RTN1Q16799 776 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 KIAA0753Q2KHM9 967 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 WWC2Q6AWC2 1192 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 KCNV1Q6PIU1 500 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 MYLIPQ8WY64 445 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 DHX38Q92620 1227 aaKnown RBP15.83■□□□□ 0.12
SCAF1-203ENST00000598359 JAKMIP1Q96N16 626 aaKnown RBP15.83■□□□□ 0.12
SCAF1-203ENST00000598359 INPP4AQ96PE3 977 aaPredicted RBP15.83■□□□□ 0.12
SCAF1-203ENST00000598359 PBX4Q9BYU1 374 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 MLXIPQ9HAP2 919 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 RAPGEFL1Q9UHV5 662 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 MYH7BA7E2Y1 1941 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 SCN5AQ14524 2016 aa15.83■□□□□ 0.12
SCAF1-203ENST00000598359 MYO9BQ13459 2157 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 ZBBXA8MT70 800 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 SPATA31C2B4DYI2 1134 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 F2P00734 622 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 HOXD8P13378 290 aaPredicted RBP15.82■□□□□ 0.12
SCAF1-203ENST00000598359 CDC27P30260 824 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 SP4Q02446 784 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 APOBRQ0VD83 1088 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 FUT2Q10981 343 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 GNPTABQ3T906 1256 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 TYW1BQ6NUM6 668 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 CYFIP1Q7L576 1253 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 C7orf31Q8N865 590 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 RETREG2Q8NC44 543 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 KCNB2Q92953 911 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 TIFAQ96CG3 184 aa15.82■□□□□ 0.12
SCAF1-203ENST00000598359 FAM217BQ9NTX9 383 aaPredicted RBP15.82■□□□□ 0.12
SCAF1-203ENST00000598359 HAS3O00219 553 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 TNFRSF10AO00220 468 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 PPFIA4O75335 1185 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 IQCF3P0C7M6 154 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 TGFB3P10600 412 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 ICAM3P32942 547 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 HSPA4P34932 840 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 RABGGTBP53611 331 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 FGD1P98174 961 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 GRIN2CQ14957 1233 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 PCNX4Q63HM2 1172 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 Q6ZUG5 572 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 SESTD1Q86VW0 696 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 RPUSD2Q8IZ73 545 aaKnown RBP15.81■□□□□ 0.12
SCAF1-203ENST00000598359 WNT8BQ93098 351 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 PGBD1Q96JS3 809 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 C16orf70Q9BSU1 422 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 RBM28Q9NW13 759 aaKnown RBP15.81■□□□□ 0.12
SCAF1-203ENST00000598359 GTF2IRD1Q9UHL9 959 aa15.81■□□□□ 0.12
SCAF1-203ENST00000598359 V9GY48 417 aaPredicted RBP15.81■□□□□ 0.12
SCAF1-203ENST00000598359 DOCK5Q9H7D0 1870 aa15.8■□□□□ 0.12
SCAF1-203ENST00000598359 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
SCAF1-203ENST00000598359 FIBPO43427 364 aa15.8■□□□□ 0.12
SCAF1-203ENST00000598359 FOSL2P15408 326 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms