RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 CCND2P30279 289 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 EVCP57679 992 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 ARHGAP1Q07960 439 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 SSRP1Q08945 709 aaKnown RBP17.71■□□□□ 0.43
XRCC1-206ENST00000597811 UBE2SQ16763 222 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 BRDTQ58F21 947 aaPredicted RBP17.71■□□□□ 0.43
XRCC1-206ENST00000597811 C16orf59Q7L2K0 433 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 TMEM199Q8N511 208 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 ZNF713Q8N859 430 aaPredicted RBP17.71■□□□□ 0.43
XRCC1-206ENST00000597811 PPP1R13LQ8WUF5 828 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.71■□□□□ 0.437e-7■□□□□ 8.9
XRCC1-206ENST00000597811 PDCD2LQ9BRP1 358 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 ALDH8A1Q9H2A2 487 aaPredicted RBP17.71■□□□□ 0.43
XRCC1-206ENST00000597811 HIPK3Q9H422 1215 aa17.71■□□□□ 0.43
XRCC1-206ENST00000597811 TRMT13Q9NUP7 481 aaKnown RBP17.71■□□□□ 0.43
XRCC1-206ENST00000597811 PRUNE2Q8WUY3 3088 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 CHD9Q3L8U1 2897 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 SMCO2A6NFE2 343 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 PRPF3O43395 683 aaKnown RBP17.7■□□□□ 0.42
XRCC1-206ENST00000597811 EIF3JO75822 258 aaKnown RBP17.7■□□□□ 0.42
XRCC1-206ENST00000597811 GH1P01241 217 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 ADCY7P51828 1080 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 PPIGQ13427 754 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■■■□□ 15.7
XRCC1-206ENST00000597811 PGM5Q15124 567 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 PFKFB3Q16875 520 aaPredicted RBP17.7■□□□□ 0.42
XRCC1-206ENST00000597811 NBPF20Q3BBV1 942 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 FAM109BQ6ICB4 259 aaPredicted RBP17.7■□□□□ 0.42
XRCC1-206ENST00000597811 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 AFG1LQ8WV93 481 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 ZFP91Q96JP5 570 aaPredicted RBP17.7■□□□□ 0.42
XRCC1-206ENST00000597811 NOC4LQ9BVI4 516 aaKnown RBP17.7■□□□□ 0.42
XRCC1-206ENST00000597811 BARHL2Q9NY43 387 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 TPCN1Q9ULQ1 816 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 MYO9BQ13459 2157 aa17.7■□□□□ 0.42
XRCC1-206ENST00000597811 NID2Q14112 1375 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 CDKL5O76039 1030 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 RGS20O76081 388 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 MMP3P08254 477 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 ACRP10323 421 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 IFNAR1P17181 557 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 SMAD3P84022 425 aaKnown RBP17.69■□□□□ 0.42
XRCC1-206ENST00000597811 TMEM240Q5SV17 173 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 PPP1R18Q6NYC8 613 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 CCDC12Q8WUD4 166 aaPredicted RBP17.69■□□□□ 0.42
XRCC1-206ENST00000597811 FAM161BQ96MY7 647 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 RNF26Q9BY78 433 aaPredicted RBP17.69■□□□□ 0.42
XRCC1-206ENST00000597811 EHMT1Q9H9B1 1298 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 DDX41Q9UJV9 622 aaKnown RBP17.69■□□□□ 0.42
XRCC1-206ENST00000597811 MRVI1Q9Y6F6 885 aa17.69■□□□□ 0.42
XRCC1-206ENST00000597811 STXBP3O00186 592 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 PIK3CDO00329 1044 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 MEIS2O14770 477 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 KPNA6O60684 536 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 CCL23P55773 120 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 ZNF697Q5TEC3 545 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 VSIG10LQ86VR7 867 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 GUCD1Q96NT3 240 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 WNT8AQ9H1J5 351 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 RTEL1Q9NZ71 1219 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 TET1Q8NFU7 2136 aa17.68■□□□□ 0.42
XRCC1-206ENST00000597811 CYP2C9P11712 490 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 SCRN1Q12765 414 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 NTRK3Q16288 839 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 FAM47CQ5HY64 1035 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 NFRKBQ6P4R8 1299 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 ZNF365Q70YC5 407 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 GLT8D2Q9H1C3 349 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 C6orf50Q9HD87 102 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 IL23AQ9NPF7 189 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 RIC8AQ9NPQ8 531 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 PCDHA6Q9UN73 950 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 STXBP5LQ9Y2K9 1186 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 PCDHA8Q9Y5H6 950 aa17.67■□□□□ 0.42
XRCC1-206ENST00000597811 CHD7Q9P2D1 2997 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 PFKFB2O60825 505 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 SUPT20HL2P0C7V6 817 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 GNPTABQ3T906 1256 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 RASIP1Q5U651 963 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 TYW1BQ6NUM6 668 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 PSRC1Q6PGN9 363 aaPredicted RBP17.66■□□□□ 0.42
XRCC1-206ENST00000597811 NECAB1Q8N987 351 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 CCDC148Q8NFR7 591 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 KAT2BQ92831 832 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 EMID1Q96A84 441 aaPredicted RBP17.66■□□□□ 0.42
XRCC1-206ENST00000597811 IL17RAQ96F46 866 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 VPS54Q9P1Q0 977 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 FRMPD4Q14CM0 1322 aa17.66■□□□□ 0.42
XRCC1-206ENST00000597811 SORBS3O60504 671 aa17.65■□□□□ 0.42
XRCC1-206ENST00000597811 DEXIO95424 95 aa17.65■□□□□ 0.42
XRCC1-206ENST00000597811 GNA11P29992 359 aa17.65■□□□□ 0.42
XRCC1-206ENST00000597811 RBM25P49756 843 aaKnown RBP17.65■□□□□ 0.42
XRCC1-206ENST00000597811 NLRP5P59047 1200 aa17.65■□□□□ 0.42
XRCC1-206ENST00000597811 CHMP4BP1P59074 171 aa17.65■□□□□ 0.42
XRCC1-206ENST00000597811 PKN1Q16512 942 aa17.65■□□□□ 0.42
XRCC1-206ENST00000597811 SCLYQ96I15 445 aa17.65■□□□□ 0.42
XRCC1-206ENST00000597811 PGBD1Q96JS3 809 aa17.65■□□□□ 0.42
XRCC1-206ENST00000597811 TTYH1Q9H313 450 aaPredicted RBP17.65■□□□□ 0.42
XRCC1-206ENST00000597811 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.64■□□□□ 0.41
XRCC1-206ENST00000597811 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.64■□□□□ 0.41
XRCC1-206ENST00000597811 MRPS9P82933 396 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms