RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NLRP5P59047 1200 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 GUCY1B3Q02153 619 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 MCTP1Q6DN14 999 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 FBXO18Q8NFZ0 1043 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 XPNPEP3Q9NQH7 507 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 PCDHA1Q9Y5I3 950 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 DNAH14Q0VDD8 3507 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 ABCB11O95342 1321 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 PPP1R11O60927 126 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 COBLO75128 1261 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 PGK1P00558 417 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 MMP1P03956 469 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 MYOGP15173 224 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 KRT2P35908 639 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 ADCY7P51828 1080 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 RABGGTBP53611 331 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 OAZ1P54368 228 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 RNF180Q86T96 592 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 CPXCR1Q8N123 301 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 RAVER2Q9HCJ3 691 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 C6orf50Q9HD87 102 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 KCNJ14Q9UNX9 436 aa13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 MRPL11Q9Y3B7 192 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-213ENST00000597325 ESYT2A0FGR8 921 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 EPOPA6NHQ4 379 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 ZSCAN22P10073 491 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 GNA11P29992 359 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 PLS1Q14651 629 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 FOXD4L5Q5VV16 416 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 GALNT17Q6IS24 598 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 FAM178BQ8IXR5 827 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 GJD3Q8N144 294 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 TMEM199Q8N511 208 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 BICD2Q8TD16 824 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 FOXD4L4Q8WXT5 416 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 PHF20Q9BVI0 1012 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 TEX13BQ9BXU2 312 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 GLT8D2Q9H1C3 349 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 IL23AQ9NPF7 189 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 GJB4Q9NTQ9 266 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 ADAMTS5Q9UNA0 930 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 MTMR6Q9Y217 621 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 PCDHA11Q9Y5I1 949 aa13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 ZFHX2Q9C0A1 2572 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 COL11A1P12107 1806 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-213ENST00000597325 WDR87Q6ZQQ6 2873 aa13.77□□□□□ -0.2
SHKBP1-213ENST00000597325 SMCO2A6NFE2 343 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 ZNF536O15090 1300 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 STRNO43815 780 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 GTPBP6O43824 516 aaPredicted RBP13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 ADAMTS4O75173 837 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 BRD1O95696 1058 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 RARBP10826 455 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 ALAS1P13196 640 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 ALADP13716 330 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 CDK7P50613 346 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 PKP1Q13835 747 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 SNRNP48Q6IEG0 339 aaKnown RBP13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 DIS3L2Q8IYB7 885 aaKnown RBP13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 CUL5Q93034 780 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 AGBL1Q96MI9 1066 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 TSEN34Q9BSV6 310 aaKnown RBP13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 ZMYND12Q9H0C1 365 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 STARD7Q9NQZ5 370 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 PCDHA4Q9UN74 947 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 ATP6V1DQ9Y5K8 247 aa13.77□□□□□ -0.21
SHKBP1-213ENST00000597325 POTEB3A0JP26 581 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 ATP2A1O14983 1001 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 F13A1P00488 732 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 COPB2P35606 906 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 MRPL12P52815 198 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 ACLYP53396 1101 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 TMEM132BQ14DG7 1078 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 CSPP1Q1MSJ5 1256 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 TKFCQ3LXA3 575 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 CCSAPQ6IQ19 270 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 FERMT3Q86UX7 667 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 BLIDQ8IZY5 108 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 DAGLBQ8NCG7 672 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 REPS2Q8NFH8 660 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 MAML3Q96JK9 1138 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 ZSCAN16Q9H4T2 348 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 PSTPIP2Q9H939 334 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 RIC8AQ9NPQ8 531 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 HOMER2Q9NSB8 354 aa13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 BAZ2BQ9UIF8 2168 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-213ENST00000597325 MROH7Q68CQ1 1323 aa13.75□□□□□ -0.21
SHKBP1-213ENST00000597325 FGBP02675 491 aa13.75□□□□□ -0.21
SHKBP1-213ENST00000597325 TAL1P17542 331 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-213ENST00000597325 STAT3P40763 770 aa13.75□□□□□ -0.21
SHKBP1-213ENST00000597325 BRAPQ7Z569 592 aa13.75□□□□□ -0.21
SHKBP1-213ENST00000597325 MCF2L2Q86YR7 1114 aa13.75□□□□□ -0.21
SHKBP1-213ENST00000597325 TEX2Q8IWB9 1127 aa13.75□□□□□ -0.21
SHKBP1-213ENST00000597325 REXO1Q8N1G1 1221 aaKnown RBP13.75□□□□□ -0.21
SHKBP1-213ENST00000597325 MOV10L1Q9BXT6 1211 aaKnown RBP13.75□□□□□ -0.21
SHKBP1-213ENST00000597325 SPATC1LQ9H0A9 340 aa13.75□□□□□ -0.21
SHKBP1-213ENST00000597325 MTIF3Q9H2K0 278 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms