RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 TNFAIP2Q03169 654 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 CEP55Q53EZ4 464 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 XRRA1Q6P2D8 792 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 PLA2G4DQ86XP0 818 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 LENG9Q96B70 501 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 RNF208Q9H0X6 261 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 FAM184BQ9ULE4 1060 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 SEPT4O43236 478 aa17.63■□□□□ 0.41
SMCO4-206ENST00000596676 CCNT1O60563 726 aaKnown RBP17.63■□□□□ 0.41
SMCO4-206ENST00000596676 DDIT3P35638 169 aa17.63■□□□□ 0.41
SMCO4-206ENST00000596676 ZNF174Q15697 407 aa17.63■□□□□ 0.41
SMCO4-206ENST00000596676 FOXD4L6Q3SYB3 417 aaPredicted RBP17.63■□□□□ 0.41
SMCO4-206ENST00000596676 LHX8Q68G74 356 aa17.63■□□□□ 0.41
SMCO4-206ENST00000596676 IQSEC1Q6DN90 963 aa17.63■□□□□ 0.41
SMCO4-206ENST00000596676 FOXD4L3Q6VB84 417 aaPredicted RBP17.63■□□□□ 0.41
SMCO4-206ENST00000596676 CHAMP1Q96JM3 812 aa17.63■□□□□ 0.41
SMCO4-206ENST00000596676 DEFB118Q96PH6 123 aa17.63■□□□□ 0.41
SMCO4-206ENST00000596676 DDX41Q9UJV9 622 aaKnown RBP17.63■□□□□ 0.41
SMCO4-206ENST00000596676 PCDHB6Q9Y5E3 794 aa17.63■□□□□ 0.41
SMCO4-206ENST00000596676 MRVI1Q9Y6F6 885 aa17.63■□□□□ 0.41
SMCO4-206ENST00000596676 DYNC1LI2O43237 492 aaPredicted RBP17.62■□□□□ 0.41
SMCO4-206ENST00000596676 ZSCAN22P10073 491 aaPredicted RBP17.62■□□□□ 0.41
SMCO4-206ENST00000596676 UBA1P22314 1058 aaKnown RBP17.62■□□□□ 0.41
SMCO4-206ENST00000596676 ICAM3P32942 547 aa17.62■□□□□ 0.41
SMCO4-206ENST00000596676 MTMR1Q13613 665 aa17.62■□□□□ 0.41
SMCO4-206ENST00000596676 NLRX1Q86UT6 975 aa17.62■□□□□ 0.41
SMCO4-206ENST00000596676 SCFD2Q8WU76 684 aa17.62■□□□□ 0.41
SMCO4-206ENST00000596676 MBOAT7Q96N66 472 aa17.62■□□□□ 0.41
SMCO4-206ENST00000596676 FTOQ9C0B1 505 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMCO4-206ENST00000596676 AGO4Q9HCK5 861 aaKnown RBP17.62■□□□□ 0.41
SMCO4-206ENST00000596676 PAK6Q9NQU5 681 aaPredicted RBP17.62■□□□□ 0.41
SMCO4-206ENST00000596676 KCNH7Q9NS40 1196 aa17.62■□□□□ 0.41
SMCO4-206ENST00000596676 DDX20Q9UHI6 824 aaKnown RBP17.62■□□□□ 0.41
SMCO4-206ENST00000596676 DDX25Q9UHL0 483 aaKnown RBP17.62■□□□□ 0.41
SMCO4-206ENST00000596676 NRBP1Q9UHY1 535 aa17.62■□□□□ 0.41
SMCO4-206ENST00000596676 GNEQ9Y223 722 aaKnown RBP17.62■□□□□ 0.41
SMCO4-206ENST00000596676 CYP3A7-CYP3A51PA0A087WV96 503 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 MYADML2A6NDP7 307 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 MSH4O15457 936 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 FIBPO43427 364 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 STAM2O75886 525 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 PGK1P00558 417 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 AKR1A1P14550 325 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 KCNA2P16389 499 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 CYP3A7P24462 503 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 MCM7P33993 719 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 ITGB3BPQ13352 177 aaPredicted RBP17.61■□□□□ 0.41
SMCO4-206ENST00000596676 TTLL4Q14679 1199 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 TTC38Q5R3I4 469 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 GPRASP2Q96D09 838 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 TMEM60Q9H2L4 133 aa17.61■□□□□ 0.41
SMCO4-206ENST00000596676 DAXXQ9UER7 740 aaPredicted RBP17.61■□□□□ 0.41
SMCO4-206ENST00000596676 GGPS1O95749 300 aa17.6■□□□□ 0.41
SMCO4-206ENST00000596676 MYCNP04198 464 aaPredicted RBP17.6■□□□□ 0.41
SMCO4-206ENST00000596676 BEX3Q00994 111 aa17.6■□□□□ 0.41
SMCO4-206ENST00000596676 GNPTABQ3T906 1256 aa17.6■□□□□ 0.41
SMCO4-206ENST00000596676 Q4G0T1 1027 aa17.6■□□□□ 0.41
SMCO4-206ENST00000596676 DUSP28Q4G0W2 176 aa17.6■□□□□ 0.41
SMCO4-206ENST00000596676 MYSM1Q5VVJ2 828 aa17.6■□□□□ 0.41
SMCO4-206ENST00000596676 PPP4R3AQ6IN85 833 aa17.6■□□□□ 0.41
SMCO4-206ENST00000596676 CYFIP1Q7L576 1253 aa17.6■□□□□ 0.41
SMCO4-206ENST00000596676 ABHD8Q96I13 439 aa17.6■□□□□ 0.41
SMCO4-206ENST00000596676 DDX39AO00148 427 aaKnown RBP17.59■□□□□ 0.41
SMCO4-206ENST00000596676 CTAGE5O15320 804 aa17.59■□□□□ 0.41
SMCO4-206ENST00000596676 DHX15O43143 795 aaKnown RBP17.59■□□□□ 0.41
SMCO4-206ENST00000596676 BRD1O95696 1058 aa17.59■□□□□ 0.41
SMCO4-206ENST00000596676 F13A1P00488 732 aa17.59■□□□□ 0.41
SMCO4-206ENST00000596676 SP4Q02446 784 aa17.59■□□□□ 0.41
SMCO4-206ENST00000596676 ARHGAP1Q07960 439 aa17.59■□□□□ 0.41
SMCO4-206ENST00000596676 NIPA1Q7RTP0 329 aa17.59■□□□□ 0.41
SMCO4-206ENST00000596676 TLK2Q86UE8 772 aa17.59■□□□□ 0.41
SMCO4-206ENST00000596676 OR6J1Q8NGC5 347 aa17.59■□□□□ 0.41
SMCO4-206ENST00000596676 HAS1Q92839 578 aa17.59■□□□□ 0.41
SMCO4-206ENST00000596676 IPO9Q96P70 1041 aaKnown RBP17.59■□□□□ 0.41
SMCO4-206ENST00000596676 FRMPD3Q5JV73 1810 aa17.58■□□□□ 0.41
SMCO4-206ENST00000596676 SYNRGQ9UMZ2 1314 aa17.58■□□□□ 0.4
SMCO4-206ENST00000596676 DUSP11O75319 330 aaKnown RBP17.58■□□□□ 0.4
SMCO4-206ENST00000596676 RARBP10826 455 aa17.58■□□□□ 0.4
SMCO4-206ENST00000596676 CELF3Q5SZQ8 465 aaKnown RBP17.58■□□□□ 0.4
SMCO4-206ENST00000596676 MOXD1Q6UVY6 613 aa17.58■□□□□ 0.4
SMCO4-206ENST00000596676 BRAPQ7Z569 592 aa17.58■□□□□ 0.4
SMCO4-206ENST00000596676 DHX37Q8IY37 1157 aaKnown RBP17.58■□□□□ 0.4
SMCO4-206ENST00000596676 TNS4Q8IZW8 715 aa17.58■□□□□ 0.4
SMCO4-206ENST00000596676 C4orf32Q8N8J7 132 aa17.58■□□□□ 0.4
SMCO4-206ENST00000596676 ETNPPLQ8TBG4 499 aa17.58■□□□□ 0.4
SMCO4-206ENST00000596676 ZNF577Q9BSK1 485 aa17.58■□□□□ 0.4
SMCO4-206ENST00000596676 XPNPEP3Q9NQH7 507 aa17.58■□□□□ 0.4
SMCO4-206ENST00000596676 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.4
SMCO4-206ENST00000596676 NOL7Q9UMY1 257 aaKnown RBP17.58■□□□□ 0.4
SMCO4-206ENST00000596676 IPO5O00410 1097 aaKnown RBP17.57■□□□□ 0.4
SMCO4-206ENST00000596676 ADAMTS4O75173 837 aa17.57■□□□□ 0.4
SMCO4-206ENST00000596676 FARP2O94887 1054 aaPredicted RBP17.57■□□□□ 0.4
SMCO4-206ENST00000596676 GH1P01241 217 aa17.57■□□□□ 0.4
SMCO4-206ENST00000596676 GJB1P08034 283 aa17.57■□□□□ 0.4
SMCO4-206ENST00000596676 TGFB3P10600 412 aa17.57■□□□□ 0.4
SMCO4-206ENST00000596676 GCFC2P16383 781 aaKnown RBP17.57■□□□□ 0.4
SMCO4-206ENST00000596676 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
SMCO4-206ENST00000596676 HSDL1Q3SXM5 330 aa17.57■□□□□ 0.4
SMCO4-206ENST00000596676 AFG1LQ8WV93 481 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms