RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 FIBPO43427 364 aa18.12■□□□□ 0.49
ZNF550-207ENST00000595560 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
ZNF550-207ENST00000595560 GGPS1O95749 300 aa18.12■□□□□ 0.49
ZNF550-207ENST00000595560 PDIA3P30101 505 aaKnown RBP18.12■□□□□ 0.49
ZNF550-207ENST00000595560 PTPN11Q06124 597 aaPredicted RBP18.12■□□□□ 0.49
ZNF550-207ENST00000595560 PFKFB3Q16875 520 aaPredicted RBP18.12■□□□□ 0.49
ZNF550-207ENST00000595560 NBPF20Q3BBV1 942 aa18.12■□□□□ 0.49
ZNF550-207ENST00000595560 MFSD5Q6N075 450 aa18.12■□□□□ 0.49
ZNF550-207ENST00000595560 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
ZNF550-207ENST00000595560 TRPV6Q9H1D0 765 aa18.12■□□□□ 0.49
ZNF550-207ENST00000595560 SUPT20HL2P0C7V6 817 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 SCG2P13521 617 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 ADCY7P51828 1080 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 ANAPC15P60006 121 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 SEMA3FQ13275 785 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 NTRK3Q16288 839 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 KAT2BQ92831 832 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 SPATA33Q96N06 139 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 GLT8D2Q9H1C3 349 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 HIPK3Q9H422 1215 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 EHMT1Q9H9B1 1298 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 RTEL1Q9NZ71 1219 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 PCDHA6Q9UN73 950 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 PCDHA8Q9Y5H6 950 aa18.11■□□□□ 0.49
ZNF550-207ENST00000595560 TANC1Q9C0D5 1861 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 PRPF3O43395 683 aaKnown RBP18.1■□□□□ 0.49
ZNF550-207ENST00000595560 PPFIA4O75335 1185 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 F2P00734 622 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 NEDD9Q14511 834 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 SHHQ15465 462 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 HSDL1Q3SXM5 330 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 FAM47CQ5HY64 1035 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 C9orf50Q5SZB4 431 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 NLRX1Q86UT6 975 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 SESTD1Q86VW0 696 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 GPRASP2Q96D09 838 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 LRCH3Q96II8 777 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 SENP7Q9BQF6 1050 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 NOC4LQ9BVI4 516 aaKnown RBP18.1■□□□□ 0.49
ZNF550-207ENST00000595560 KATNAL1Q9BW62 490 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 RNF26Q9BY78 433 aaPredicted RBP18.1■□□□□ 0.49
ZNF550-207ENST00000595560 PPP1R12CQ9BZL4 782 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 MLXIPQ9HAP2 919 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
ZNF550-207ENST00000595560 TRMT13Q9NUP7 481 aaKnown RBP18.1■□□□□ 0.49
ZNF550-207ENST00000595560 ESYT2A0FGR8 921 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 SMCO2A6NFE2 343 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 FOSP01100 380 aaPredicted RBP18.09■□□□□ 0.49
ZNF550-207ENST00000595560 IFNAR1P17181 557 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 CLK2P49760 499 aaKnown RBP18.09■□□□□ 0.49
ZNF550-207ENST00000595560 EPHB4P54760 987 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 AP3B2Q13367 1082 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.497e-6■□□□□ 9.9
ZNF550-207ENST00000595560 PKN1Q16512 942 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 GPR153Q6NV75 609 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 METTL7BQ6UX53 244 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 TMEM199Q8N511 208 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 PHKBQ93100 1093 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 IL17RAQ96F46 866 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 ZNF274Q96GC6 653 aaPredicted RBP18.09■□□□□ 0.49
ZNF550-207ENST00000595560 CDHR1Q96JP9 859 aa18.09■□□□□ 0.49
ZNF550-207ENST00000595560 NCOA5Q9HCD5 579 aaKnown RBP18.09■□□□□ 0.49
ZNF550-207ENST00000595560 HAS3O00219 553 aa18.08■□□□□ 0.48
ZNF550-207ENST00000595560 SORBS3O60504 671 aa18.08■□□□□ 0.48
ZNF550-207ENST00000595560 ZNF286BP0CG31 522 aa18.08■□□□□ 0.48
ZNF550-207ENST00000595560 ITGB5P18084 799 aa18.08■□□□□ 0.48
ZNF550-207ENST00000595560 CYP2C18P33260 490 aa18.08■□□□□ 0.48
ZNF550-207ENST00000595560 CCT2P78371 535 aaKnown RBP18.08■□□□□ 0.48
ZNF550-207ENST00000595560 AKAP17AQ02040 695 aaKnown RBP18.08■□□□□ 0.48
ZNF550-207ENST00000595560 GIMAP8Q8ND71 665 aaPredicted RBP18.08■□□□□ 0.48
ZNF550-207ENST00000595560 CCDC12Q8WUD4 166 aaPredicted RBP18.08■□□□□ 0.48
ZNF550-207ENST00000595560 ZMYND12Q9H0C1 365 aa18.08■□□□□ 0.48
ZNF550-207ENST00000595560 UBIAD1Q9Y5Z9 338 aa18.08■□□□□ 0.48
ZNF550-207ENST00000595560 UMODL1Q5DID0 1318 aa18.07■□□□□ 0.48
ZNF550-207ENST00000595560 CSF2RAP15509 400 aa18.07■□□□□ 0.48
ZNF550-207ENST00000595560 PSEN2P49810 448 aa18.07■□□□□ 0.48
ZNF550-207ENST00000595560 CYFIP1Q7L576 1253 aa18.07■□□□□ 0.48
ZNF550-207ENST00000595560 PPP1R13LQ8WUF5 828 aa18.07■□□□□ 0.48
ZNF550-207ENST00000595560 ANO3Q9BYT9 981 aa18.07■□□□□ 0.48
ZNF550-207ENST00000595560 BCAS3Q9H6U6 928 aa18.07■□□□□ 0.48
ZNF550-207ENST00000595560 NOP56O00567 594 aaKnown RBP18.06■□□□□ 0.48
ZNF550-207ENST00000595560 MAFGO15525 162 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 CYP2C9P11712 490 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 SREBF1P36956 1147 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 CHMP4BP1P59074 171 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 MTMR1Q13613 665 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 MFSD10Q14728 455 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 KIAA0753Q2KHM9 967 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 RNPC3Q96LT9 517 aaKnown RBP18.06■□□□□ 0.48
ZNF550-207ENST00000595560 C16orf70Q9BSU1 422 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 SLC26A6Q9BXS9 759 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 WNT8AQ9H1J5 351 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 GTF2IRD1Q9UHL9 959 aa18.06■□□□□ 0.48
ZNF550-207ENST00000595560 TRIP12Q14669 1992 aaPredicted RBP18.06■□□□□ 0.48
ZNF550-207ENST00000595560 SCN5AQ14524 2016 aa18.05■□□□□ 0.48
ZNF550-207ENST00000595560 PITPNM1O00562 1244 aa18.05■□□□□ 0.48
ZNF550-207ENST00000595560 CPLX1O14810 134 aa18.05■□□□□ 0.48
ZNF550-207ENST00000595560 KCNA2P16389 499 aa18.05■□□□□ 0.48
ZNF550-207ENST00000595560 PTGISQ16647 500 aa18.05■□□□□ 0.48
ZNF550-207ENST00000595560 MCTP2Q6DN12 878 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms