RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 UBA1P22314 1058 aaKnown RBP27.05■■□□□ 1.92
LSM4-204ENST00000594828 KRT32Q14532 448 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 ADCK5Q3MIX3 580 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 HSDL1Q3SXM5 330 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 GDF6Q6KF10 455 aaPredicted RBP27.05■■□□□ 1.92
LSM4-204ENST00000594828 TMTC3Q6ZXV5 915 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 DEFB128Q7Z7B8 93 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 C7orf31Q8N865 590 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 VWCEQ96DN2 955 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 ALG1Q9BT22 464 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 PBX4Q9BYU1 374 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 RTEL1Q9NZ71 1219 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 MYH7BA7E2Y1 1941 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 COL6A3P12111 3177 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 hCG_1642624A0A1W2PR95 340 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 IQCF3P0C7M6 154 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 ZNF286BP0CG31 522 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 HOXD8P13378 290 aaPredicted RBP27.04■■□□□ 1.92
LSM4-204ENST00000594828 RFC2P35250 354 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 PBX2P40425 430 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 MFSD10Q14728 455 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 KIAA0753Q2KHM9 967 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 TCEANC2Q96MN5 208 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 INPP4AQ96PE3 977 aaPredicted RBP27.04■■□□□ 1.92
LSM4-204ENST00000594828 PSTPIP2Q9H939 334 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 HDAC6Q9UBN7 1215 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 GTF2IRD1Q9UHL9 959 aa27.04■■□□□ 1.92
LSM4-204ENST00000594828 HAS3O00219 553 aa27.03■■□□□ 1.92
LSM4-204ENST00000594828 F2P00734 622 aa27.03■■□□□ 1.92
LSM4-204ENST00000594828 ICAM3P32942 547 aa27.03■■□□□ 1.92
LSM4-204ENST00000594828 APOA5Q6Q788 366 aa27.03■■□□□ 1.92
LSM4-204ENST00000594828 MYLIPQ8WY64 445 aa27.03■■□□□ 1.92
LSM4-204ENST00000594828 ZNF576Q9H609 170 aa27.03■■□□□ 1.92
LSM4-204ENST00000594828 SLC4A7Q9Y6M7 1214 aa27.03■■□□□ 1.92
LSM4-204ENST00000594828 SPATA31C2B4DYI2 1134 aa27.02■■□□□ 1.92
LSM4-204ENST00000594828 PCNX4Q63HM2 1172 aa27.02■■□□□ 1.92
LSM4-204ENST00000594828 XRRA1Q6P2D8 792 aa27.02■■□□□ 1.92
LSM4-204ENST00000594828 CCDC155Q8N6L0 562 aa27.02■■□□□ 1.92
LSM4-204ENST00000594828 CAGE1Q8TC20 777 aa27.02■■□□□ 1.92
LSM4-204ENST00000594828 CTAGE1Q96RT6 745 aa27.02■■□□□ 1.92
LSM4-204ENST00000594828 RBM28Q9NW13 759 aaKnown RBP27.02■■□□□ 1.92
LSM4-204ENST00000594828 MSRAQ9UJ68 235 aa27.02■■□□□ 1.92
LSM4-204ENST00000594828 ZBBXA8MT70 800 aa27.01■■□□□ 1.91
LSM4-204ENST00000594828 FIBPO43427 364 aa27.01■■□□□ 1.91
LSM4-204ENST00000594828 HMGB1P09429 215 aaKnown RBP27.01■■□□□ 1.91
LSM4-204ENST00000594828 NEDD9Q14511 834 aa27.01■■□□□ 1.91
LSM4-204ENST00000594828 GRIN2CQ14957 1233 aa27.01■■□□□ 1.91
LSM4-204ENST00000594828 RAB30Q15771 203 aa27.01■■□□□ 1.91
LSM4-204ENST00000594828 BCAS3Q9H6U6 928 aa27.01■■□□□ 1.91
LSM4-204ENST00000594828 BRPF3Q9ULD4 1205 aa27.01■■□□□ 1.91
LSM4-204ENST00000594828 ZBTB43O43298 467 aa27■■□□□ 1.91
LSM4-204ENST00000594828 AFAP1L1Q8TED9 768 aa27■■□□□ 1.91
LSM4-204ENST00000594828 NOP56O00567 594 aaKnown RBP26.99■■□□□ 1.91
LSM4-204ENST00000594828 ACTN1P12814 892 aa26.99■■□□□ 1.91
LSM4-204ENST00000594828 SEMA3FQ13275 785 aa26.99■■□□□ 1.91
LSM4-204ENST00000594828 RTN1Q16799 776 aa26.99■■□□□ 1.91
LSM4-204ENST00000594828 CYFIP1Q7L576 1253 aa26.99■■□□□ 1.91
LSM4-204ENST00000594828 HEATR3Q7Z4Q2 680 aa26.99■■□□□ 1.91
LSM4-204ENST00000594828 NLRX1Q86UT6 975 aa26.99■■□□□ 1.91
LSM4-204ENST00000594828 C16orf70Q9BSU1 422 aa26.99■■□□□ 1.91
LSM4-204ENST00000594828 FTOQ9C0B1 505 aaKnown RBP eCLIP26.99■■□□□ 1.91
LSM4-204ENST00000594828 FOSL2P15408 326 aa26.98■■□□□ 1.91
LSM4-204ENST00000594828 METTL7BQ6UX53 244 aa26.98■■□□□ 1.91
LSM4-204ENST00000594828 KLF18A0A0U1RQI7 1052 aa26.97■■□□□ 1.91
LSM4-204ENST00000594828 H3BRB1 525 aa26.97■■□□□ 1.91
LSM4-204ENST00000594828 SELPP16109 830 aa26.97■■□□□ 1.91
LSM4-204ENST00000594828 FGD1P98174 961 aa26.97■■□□□ 1.91
LSM4-204ENST00000594828 UBE2SQ16763 222 aa26.97■■□□□ 1.91
LSM4-204ENST00000594828 DHX38Q92620 1227 aaKnown RBP26.97■■□□□ 1.91
LSM4-204ENST00000594828 KCNB2Q92953 911 aa26.97■■□□□ 1.91
LSM4-204ENST00000594828 SENP7Q9BQF6 1050 aa26.97■■□□□ 1.91
LSM4-204ENST00000594828 USP26Q9BXU7 913 aa26.97■■□□□ 1.91
LSM4-204ENST00000594828 TUT1Q9H6E5 874 aaKnown RBP26.97■■□□□ 1.91
LSM4-204ENST00000594828 CNTNAP5Q8WYK1 1306 aa26.96■■□□□ 1.91
LSM4-204ENST00000594828 SCN5AQ14524 2016 aa26.96■■□□□ 1.91
LSM4-204ENST00000594828 SPDYE3A6NKU9 549 aa26.96■■□□□ 1.91
LSM4-204ENST00000594828 ATP2A2P16615 1042 aaKnown RBP26.96■■□□□ 1.91
LSM4-204ENST00000594828 HSPA4P34932 840 aa26.96■■□□□ 1.91
LSM4-204ENST00000594828 PTK7Q13308 1070 aa26.96■■□□□ 1.91
LSM4-204ENST00000594828 MAFAQ8NHW3 353 aaPredicted RBP26.96■■□□□ 1.91
LSM4-204ENST00000594828 GOLGA8AA7E2F4 631 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 GOLGA8BA8MQT2 603 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 LGALS2P05162 132 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 CKBP12277 381 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 RABGGTBP53611 331 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 ZNF200P98182 395 aaPredicted RBP26.95■■□□□ 1.9
LSM4-204ENST00000594828 RBL2Q08999 1139 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 FUT2Q10981 343 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 LRRC8DQ7L1W4 858 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 GPR20Q99678 358 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 NKX2-4Q9H2Z4 354 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 SLC28A3Q9HAS3 691 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 NAP1L2Q9ULW6 460 aaPredicted RBP26.95■■□□□ 1.9
LSM4-204ENST00000594828 PCDHA6Q9UN73 950 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 PCDHA8Q9Y5H6 950 aa26.95■■□□□ 1.9
LSM4-204ENST00000594828 V9GY48 417 aaPredicted RBP26.95■■□□□ 1.9
LSM4-204ENST00000594828 PARNO95453 639 aaKnown RBP26.94■■□□□ 1.9
LSM4-204ENST00000594828 NEFLP07196 543 aa26.94■■□□□ 1.9
LSM4-204ENST00000594828 CPA1P15085 419 aa26.94■■□□□ 1.9
LSM4-204ENST00000594828 WWC2Q6AWC2 1192 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms