RNA–Protein interactions for RNA: ENST00000594792.5

U2AF1L4-219, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-219	ENST00000594792	RBM28	Q9NW13	759 aa	Known RBP	12.84	□□□□□ -0.35
U2AF1L4-219	ENST00000594792	WDR81	Q562E7	1941 aa		12.84	□□□□□ -0.35
U2AF1L4-219	ENST00000594792	STXBP3	O00186	592 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	F2	P00734	622 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	CAST	P20810	708 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	ADD1	P35611	737 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	CCL23	P55773	120 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	TOB2	Q14106	344 aa	Predicted RBP	12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	FAM47C	Q5HY64	1035 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	TMEM240	Q5SV17	173 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	RASIP1	Q5U651	963 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PCNX4	Q63HM2	1172 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	GDF6	Q6KF10	455 aa	Predicted RBP	12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	GPR153	Q6NV75	609 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	NFRKB	Q6P4R8	1299 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	DHX37	Q8IY37	1157 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	FBXL16	Q8N461	479 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	SCLY	Q96I15	445 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PGBD1	Q96JS3	809 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	RNPC3	Q96LT9	517 aa	Known RBP	12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PSTPIP2	Q9H939	334 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	RTEL1	Q9NZ71	1219 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	TET1	Q8NFU7	2136 aa		12.83	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	SPATA31C2	B4DYI2	1134 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	HAS3	O00219	553 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	KPNA6	O60684	536 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PPFIA3	O75145	1194 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	ITGB5	P18084	799 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	ICAM3	P32942	547 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	RCAN1	P53805	252 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	CHMP4BP1	P59074	171 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	LAMC2	Q13753	1193 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	BRDT	Q58F21	947 aa	Predicted RBP	12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	ERICH6B	Q5W0A0	696 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	SYNE3	Q6ZMZ3	975 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	DEFB123	Q8N688	67 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	DHX38	Q92620	1227 aa	Known RBP	12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	C16orf70	Q9BSU1	422 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	SEZ6L	Q9BYH1	1024 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792		V9GY48	417 aa	Predicted RBP	12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	REV3L	O60673	3130 aa		12.82	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	METAP2	P50579	478 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	EVC	P57679	992 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PPIG	Q13427	754 aa	Known RBP eCLIP	12.81	□□□□□ -0.36	1e-7	■■■■□ 21.9
U2AF1L4-219	ENST00000594792	NTRK3	Q16288	839 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PKN1	Q16512	942 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	DGKD	Q16760	1214 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	KCNV1	Q6PIU1	500 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	ZNF365	Q70YC5	407 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	RUFY3	Q7L099	469 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	SESTD1	Q86VW0	696 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	TMEM199	Q8N511	208 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	CUL5	Q93034	780 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	WNT8B	Q93098	351 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	SPATA33	Q96N06	139 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	GUCD1	Q96NT3	240 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	UPF3B	Q9BZI7	483 aa	Known RBP	12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	TTYH1	Q9H313	450 aa	Predicted RBP	12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	NCOA5	Q9HCD5	579 aa	Known RBP	12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	ZSWIM6	Q9HCJ5	1215 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	IL23A	Q9NPF7	189 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	TMEM260	Q9NX78	707 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	MTMR10	Q9NXD2	777 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	CHD7	Q9P2D1	2997 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PCDHA6	Q9UN73	950 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PCDHA8	Q9Y5H6	950 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	UNC80	Q8N2C7	3258 aa		12.81	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	COL4A4	P53420	1690 aa	Predicted RBP	12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	GRXCR1	A8MXD5	290 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	FIBP	O43427	364 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	EPB41L2	O43491	1005 aa	Known RBP	12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	ATP9A	O75110	1047 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	STAM2	O75886	525 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	TGFB3	P10600	412 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	KCNA2	P16389	499 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	CLK2	P49760	499 aa	Known RBP	12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PSEN2	P49810	448 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	NAPA	P54920	295 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PTPN11	Q06124	597 aa	Predicted RBP	12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	MFSD10	Q14728	455 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PFKFB3	Q16875	520 aa	Predicted RBP	12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	KIAA0753	Q2KHM9	967 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PPP1R18	Q6NYC8	613 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	CYFIP1	Q7L576	1253 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	TRIM50	Q86XT4	487 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PHKB	Q93100	1093 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	FAM161B	Q96MY7	647 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	GPR20	Q99678	358 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	LARP6	Q9BRS8	491 aa	Known RBP	12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	ALG1	Q9BT22	464 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	RIC8A	Q9NPQ8	531 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	BARHL2	Q9NY43	387 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	HDAC6	Q9UBN7	1215 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	GTF2IRD1	Q9UHL9	959 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	UBIAD1	Q9Y5Z9	338 aa		12.8	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PRUNE2	Q8WUY3	3088 aa		12.79	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	LGALS2	P05162	132 aa		12.79	□□□□□ -0.36
U2AF1L4-219	ENST00000594792	PDIA3	P30101	505 aa	Known RBP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms