RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 CD320Q9NPF0 282 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 MAP3K20Q9NYL2 800 aaKnown RBP15.31■□□□□ 0.04
H3F3B-213ENST00000593254 PCDHA1Q9Y5I3 950 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 A6NJR5 290 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 SLC27A2O14975 620 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 DDAH1O94760 285 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 ACTN1P12814 892 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 RFC2P35250 354 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 TRAF1Q13077 416 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 COL9A3Q14050 684 aaPredicted RBP15.3■□□□□ 0.04
H3F3B-213ENST00000593254 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 STXBP2Q15833 593 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 BRDTQ58F21 947 aaPredicted RBP15.3■□□□□ 0.04
H3F3B-213ENST00000593254 CCDC62Q6P9F0 684 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 CASC1Q6TDU7 716 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 SPRED2Q7Z698 418 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 HERC6Q8IVU3 1022 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 SAMD3Q8N6K7 520 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 COPS5Q92905 334 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 MAP3K14Q99558 947 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 ANO2Q9NQ90 1003 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 GPHNQ9NQX3 736 aaPredicted RBP15.3■□□□□ 0.04
H3F3B-213ENST00000593254 PXMP2Q9NR77 195 aa15.3■□□□□ 0.04
H3F3B-213ENST00000593254 C5orf42Q9H799 3197 aa15.29■□□□□ 0.04
H3F3B-213ENST00000593254 PNMA6FA0A0J9YX94 578 aa15.29■□□□□ 0.04
H3F3B-213ENST00000593254 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
H3F3B-213ENST00000593254 PRC1O43663 620 aa15.29■□□□□ 0.04
H3F3B-213ENST00000593254 NR3C2P08235 984 aa15.29■□□□□ 0.04
H3F3B-213ENST00000593254 EIF2AK2P19525 551 aaKnown RBP15.29■□□□□ 0.04
H3F3B-213ENST00000593254 MCM5P33992 734 aa15.29■□□□□ 0.04
H3F3B-213ENST00000593254 ARHGEF16Q5VV41 709 aa15.29■□□□□ 0.04
H3F3B-213ENST00000593254 CREB3L3Q68CJ9 461 aa15.29■□□□□ 0.04
H3F3B-213ENST00000593254 ZNF654Q8IZM8 581 aa15.29■□□□□ 0.04
H3F3B-213ENST00000593254 LMCD1Q9NZU5 365 aa15.29■□□□□ 0.04
H3F3B-213ENST00000593254 KIF28PB7ZC32 967 aa15.28■□□□□ 0.04
H3F3B-213ENST00000593254 SH2B2O14492 632 aaPredicted RBP15.28■□□□□ 0.04
H3F3B-213ENST00000593254 KPNA6O60684 536 aa15.28■□□□□ 0.04
H3F3B-213ENST00000593254 MYL3P08590 195 aa15.28■□□□□ 0.04
H3F3B-213ENST00000593254 IQCF3P0C7M6 154 aa15.28■□□□□ 0.04
H3F3B-213ENST00000593254 SEPT14Q6ZU15 432 aa15.28■□□□□ 0.04
H3F3B-213ENST00000593254 ALYREFQ86V81 257 aaKnown RBP15.28■□□□□ 0.04
H3F3B-213ENST00000593254 TMEM87BQ96K49 555 aa15.28■□□□□ 0.04
H3F3B-213ENST00000593254 PDCD2LQ9BRP1 358 aa15.28■□□□□ 0.04
H3F3B-213ENST00000593254 MTG1Q9BT17 334 aaPredicted RBP15.28■□□□□ 0.04
H3F3B-213ENST00000593254 MYL10Q9BUA6 226 aa15.28■□□□□ 0.04
H3F3B-213ENST00000593254 SPZ1Q9BXG8 430 aa15.28■□□□□ 0.04
H3F3B-213ENST00000593254 PRR33A8MZF0 331 aa15.27■□□□□ 0.04
H3F3B-213ENST00000593254 EIF3JO75822 258 aaKnown RBP15.27■□□□□ 0.04
H3F3B-213ENST00000593254 GH1P01241 217 aa15.27■□□□□ 0.04
H3F3B-213ENST00000593254 SMARCA1P28370 1054 aa15.27■□□□□ 0.04
H3F3B-213ENST00000593254 HOXA13P31271 388 aaPredicted RBP15.27■□□□□ 0.04
H3F3B-213ENST00000593254 KIF5BP33176 963 aa15.27■□□□□ 0.04
H3F3B-213ENST00000593254 LIFRP42702 1097 aa15.27■□□□□ 0.04
H3F3B-213ENST00000593254 ARHGAP1Q07960 439 aa15.27■□□□□ 0.04
H3F3B-213ENST00000593254 LY6KQ17RY6 165 aa15.27■□□□□ 0.04
H3F3B-213ENST00000593254 TMTC2Q8N394 836 aa15.27■□□□□ 0.04
H3F3B-213ENST00000593254 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
H3F3B-213ENST00000593254 CTCFLQ8NI51 663 aaPredicted RBP15.27■□□□□ 0.04
H3F3B-213ENST00000593254 ZNF318Q5VUA4 2279 aa15.26■□□□□ 0.03
H3F3B-213ENST00000593254 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.26■□□□□ 0.03
H3F3B-213ENST00000593254 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
H3F3B-213ENST00000593254 BAIAP3O94812 1187 aa15.26■□□□□ 0.03
H3F3B-213ENST00000593254 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
H3F3B-213ENST00000593254 NBPF20Q3BBV1 942 aa15.26■□□□□ 0.03
H3F3B-213ENST00000593254 NFRKBQ6P4R8 1299 aa15.26■□□□□ 0.03
H3F3B-213ENST00000593254 AFG1LQ8WV93 481 aa15.26■□□□□ 0.03
H3F3B-213ENST00000593254 DDX41Q9UJV9 622 aaKnown RBP15.26■□□□□ 0.03
H3F3B-213ENST00000593254 SIP14410 1827 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 LCHNA4D1U4 455 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 CCDC69A6NI79 296 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 CDC45O75419 566 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 RGS20O76081 388 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 MMP3P08254 477 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 PGM5Q15124 567 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 RNF20Q5VTR2 975 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 NFXL1Q6ZNB6 911 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 VSIG10LQ86VR7 867 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 FAM178BQ8IXR5 827 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 IL31RAQ8NI17 732 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 EMID1Q96A84 441 aaPredicted RBP15.25■□□□□ 0.03
H3F3B-213ENST00000593254 LZTS2Q9BRK4 669 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 MRVI1Q9Y6F6 885 aa15.25■□□□□ 0.03
H3F3B-213ENST00000593254 FRMPD4Q14CM0 1322 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 PLEKHA8P1O95397 391 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 CALM1P0DP23 149 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 CALM2P0DP24 149 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 CALM3P0DP25 149 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 MYCLP12524 364 aaPredicted RBP15.24■□□□□ 0.03
H3F3B-213ENST00000593254 GNAQP50148 359 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 PTPN11Q06124 597 aaPredicted RBP15.24■□□□□ 0.03
H3F3B-213ENST00000593254 SGMS1Q86VZ5 419 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 RETREG2Q8NC44 543 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 GDPD5Q8WTR4 605 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 PIBF1Q8WXW3 757 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 RRP36Q96EU6 259 aaKnown RBP15.24■□□□□ 0.03
H3F3B-213ENST00000593254 LRRC2Q9BYS8 371 aa15.24■□□□□ 0.03
H3F3B-213ENST00000593254 FTOQ9C0B1 505 aaKnown RBP eCLIP15.24■□□□□ 0.03
H3F3B-213ENST00000593254 UBE2ZQ9H832 354 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms