RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 GDPD5Q8WTR4 605 aa20.34■□□□□ 0.85
RETREG3-212ENST00000593251 EMID1Q96A84 441 aaPredicted RBP20.34■□□□□ 0.85
RETREG3-212ENST00000593251 KATNAL1Q9BW62 490 aa20.34■□□□□ 0.85
RETREG3-212ENST00000593251 MTUS1Q9ULD2 1270 aa20.34■□□□□ 0.85
RETREG3-212ENST00000593251 KLRF2D3W0D1 207 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 HAS3O00219 553 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 F2P00734 622 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 CXCL10P02778 98 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 HIC1Q14526 733 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 SEC23AQ15436 765 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 TRIM71Q2Q1W2 868 aaKnown RBP20.33■□□□□ 0.85
RETREG3-212ENST00000593251 ZNF618Q5T7W0 954 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 FAM117BQ6P1L5 589 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 TRAF7Q6Q0C0 670 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 IL31RAQ8NI17 732 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 PDCD2LQ9BRP1 358 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 CNNM2Q9H8M5 875 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 CTNNA3Q9UI47 895 aa20.33■□□□□ 0.85
RETREG3-212ENST00000593251 PTK7Q13308 1070 aa20.32■□□□□ 0.84
RETREG3-212ENST00000593251 HOMER1Q86YM7 354 aa20.32■□□□□ 0.84
RETREG3-212ENST00000593251 MAD2L2Q9UI95 211 aa20.32■□□□□ 0.84
RETREG3-212ENST00000593251 COG5Q9UP83 839 aa20.32■□□□□ 0.84
RETREG3-212ENST00000593251 PCDHA1Q9Y5I3 950 aa20.32■□□□□ 0.84
RETREG3-212ENST00000593251 ZBTB5O15062 677 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 PARNO95453 639 aaKnown RBP20.31■□□□□ 0.84
RETREG3-212ENST00000593251 GGPS1O95749 300 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 SP2Q02086 613 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 GHRHRQ02643 423 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 AAMPQ13685 434 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 MBTPS1Q14703 1052 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 PGM5Q15124 567 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 SLC35G1Q2M3R5 365 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 HSDL1Q3SXM5 330 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 MYSM1Q5VVJ2 828 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 EXOC6Q8TAG9 804 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 GPKOWQ92917 476 aaPredicted RBP eCLIP20.31■□□□□ 0.84
RETREG3-212ENST00000593251 MTMR8Q96EF0 704 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 SPATA33Q96N06 139 aa20.31■□□□□ 0.84
RETREG3-212ENST00000593251 ABHD14A-ACY1A0A1B0GW23 586 aa20.3■□□□□ 0.84
RETREG3-212ENST00000593251 GJB5O95377 273 aa20.3■□□□□ 0.84
RETREG3-212ENST00000593251 IKBKEQ14164 716 aa20.3■□□□□ 0.84
RETREG3-212ENST00000593251 CELF3Q5SZQ8 465 aaKnown RBP20.3■□□□□ 0.84
RETREG3-212ENST00000593251 STOX1Q6ZVD7 989 aa20.3■□□□□ 0.84
RETREG3-212ENST00000593251 HLA-CQ95604 372 aa20.3■□□□□ 0.84
RETREG3-212ENST00000593251 PIGSQ96S52 555 aa20.3■□□□□ 0.84
RETREG3-212ENST00000593251 BRWD1Q9NSI6 2320 aa20.3■□□□□ 0.84
RETREG3-212ENST00000593251 LINC01553A4QN01 128 aa20.29■□□□□ 0.84
RETREG3-212ENST00000593251 PALM3A6NDB9 673 aaPredicted RBP20.29■□□□□ 0.84
RETREG3-212ENST00000593251 HOXD8P13378 290 aaPredicted RBP20.29■□□□□ 0.84
RETREG3-212ENST00000593251 UBA1P22314 1058 aaKnown RBP20.29■□□□□ 0.84
RETREG3-212ENST00000593251 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.29■□□□□ 0.84
RETREG3-212ENST00000593251 VSIG10LQ86VR7 867 aa20.29■□□□□ 0.84
RETREG3-212ENST00000593251 FCHSD1Q86WN1 690 aa20.29■□□□□ 0.84
RETREG3-212ENST00000593251 RAD9AQ99638 391 aa20.29■□□□□ 0.84
RETREG3-212ENST00000593251 BCAS3Q9H6U6 928 aa20.29■□□□□ 0.84
RETREG3-212ENST00000593251 SENP2Q9HC62 589 aa20.29■□□□□ 0.84
RETREG3-212ENST00000593251 NLRC5Q86WI3 1866 aa20.28■□□□□ 0.84
RETREG3-212ENST00000593251 PPFIA4O75335 1185 aa20.28■□□□□ 0.84
RETREG3-212ENST00000593251 KCNV1Q6PIU1 500 aa20.28■□□□□ 0.84
RETREG3-212ENST00000593251 C16orf70Q9BSU1 422 aa20.28■□□□□ 0.84
RETREG3-212ENST00000593251 SUGCTQ9HAC7 445 aa20.28■□□□□ 0.84
RETREG3-212ENST00000593251 MAP3K20Q9NYL2 800 aaKnown RBP20.28■□□□□ 0.84
RETREG3-212ENST00000593251 LGR5O75473 907 aa20.27■□□□□ 0.84
RETREG3-212ENST00000593251 CCND2P30279 289 aa20.27■□□□□ 0.84
RETREG3-212ENST00000593251 THPOP40225 353 aa20.27■□□□□ 0.84
RETREG3-212ENST00000593251 ERVK-21P61565 698 aa20.27■□□□□ 0.84
RETREG3-212ENST00000593251 GRM4Q14833 912 aa20.27■□□□□ 0.84
RETREG3-212ENST00000593251 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
RETREG3-212ENST00000593251 TGS1Q96RS0 853 aaKnown RBP20.27■□□□□ 0.84
RETREG3-212ENST00000593251 EPHX3Q9H6B9 360 aa20.27■□□□□ 0.84
RETREG3-212ENST00000593251 MLXIPQ9HAP2 919 aa20.27■□□□□ 0.84
RETREG3-212ENST00000593251 KAT6AQ92794 2004 aa20.27■□□□□ 0.84
RETREG3-212ENST00000593251 GCOM1H8Y6P7 765 aaPredicted RBP20.26■□□□□ 0.83
RETREG3-212ENST00000593251 POLR2MP0CAP2 368 aa20.26■□□□□ 0.83
RETREG3-212ENST00000593251 SERINC5Q86VE9 423 aa20.26■□□□□ 0.83
RETREG3-212ENST00000593251 DBF4BQ8NFT6 615 aa20.26■□□□□ 0.83
RETREG3-212ENST00000593251 C17orf102A2RUQ5 167 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 RSPH10B2B2RC85 870 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 IFIT3O14879 490 aaKnown RBP20.25■□□□□ 0.83
RETREG3-212ENST00000593251 CYTH3O43739 400 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 EFCAB14O75071 495 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 RSPH10BP0C881 870 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 GSPT1P15170 499 aaKnown RBP20.25■□□□□ 0.83
RETREG3-212ENST00000593251 TRDNQ13061 729 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 MYOCDQ8IZQ8 938 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 PIBF1Q8WXW3 757 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 ATP6V0A1Q93050 837 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 C17orf80Q9BSJ5 609 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 C1QTNF1Q9BXJ1 281 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 RIOX1Q9H6W3 641 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 LMCD1Q9NZU5 365 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 TAF6LQ9Y6J9 622 aa20.25■□□□□ 0.83
RETREG3-212ENST00000593251 H3BRB1 525 aa20.24■□□□□ 0.83
RETREG3-212ENST00000593251 LGALS2P05162 132 aa20.24■□□□□ 0.83
RETREG3-212ENST00000593251 CYP21A2P08686 494 aa20.24■□□□□ 0.83
RETREG3-212ENST00000593251 SMIM10L2AP0DMW4 78 aa20.24■□□□□ 0.83
RETREG3-212ENST00000593251 SMIM10L2BP0DMW5 78 aa20.24■□□□□ 0.83
RETREG3-212ENST00000593251 TGFB3P10600 412 aa20.24■□□□□ 0.83
RETREG3-212ENST00000593251 PDE4AP27815 886 aa20.24■□□□□ 0.83
RETREG3-212ENST00000593251 PTH1RQ03431 593 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms