RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 ZNF561-AS1K7EIQ3 104 aa8.44□□□□□ -1.06
VMP1-215ENST00000592619 GABRDO14764 452 aa8.44□□□□□ -1.06
VMP1-215ENST00000592619 KIR2DL1P43626 348 aaPredicted RBP8.44□□□□□ -1.06
VMP1-215ENST00000592619 KIR2DL2P43627 348 aaPredicted RBP8.44□□□□□ -1.06
VMP1-215ENST00000592619 CORO7P57737 925 aa8.44□□□□□ -1.06
VMP1-215ENST00000592619 GPR19Q15760 415 aa8.44□□□□□ -1.06
VMP1-215ENST00000592619 RSPO4Q2I0M5 234 aaPredicted RBP8.44□□□□□ -1.06
VMP1-215ENST00000592619 CREB3L3Q68CJ9 461 aa8.44□□□□□ -1.06
VMP1-215ENST00000592619 IQSEC1Q6DN90 963 aa8.44□□□□□ -1.06
VMP1-215ENST00000592619 CISD2Q8N5K1 135 aaKnown RBP8.44□□□□□ -1.06
VMP1-215ENST00000592619 COG1Q8WTW3 980 aa8.44□□□□□ -1.06
VMP1-215ENST00000592619 C8orf48Q96LL4 319 aa8.44□□□□□ -1.06
VMP1-215ENST00000592619 SPTLC3Q9NUV7 552 aa8.44□□□□□ -1.06
VMP1-215ENST00000592619 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.44□□□□□ -1.06
VMP1-215ENST00000592619 TRHDEQ9UKU6 1024 aa8.44□□□□□ -1.06
VMP1-215ENST00000592619 PPP1R11O60927 126 aaPredicted RBP8.43□□□□□ -1.06
VMP1-215ENST00000592619 PRKD3O94806 890 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 PDE6AP16499 860 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 SPIRE1Q08AE8 756 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 DUSP4Q13115 394 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 HHIPL2Q6UWX4 724 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 SLCO6A1Q86UG4 719 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 EFHBQ8N7U6 833 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 RELTQ969Z4 430 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 CHMP4CQ96CF2 233 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 TRMT2BQ96GJ1 504 aaKnown RBP8.43□□□□□ -1.06
VMP1-215ENST00000592619 HHIPL1Q96JK4 782 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 KCNJ15Q99712 375 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 BOCQ9BWV1 1114 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 JAM3Q9BX67 310 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 OXSMQ9NWU1 459 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 PEG3Q9GZU2 1588 aa8.43□□□□□ -1.06
VMP1-215ENST00000592619 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.42□□□□□ -1.06
VMP1-215ENST00000592619 E2F8A0AVK6 867 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 TSPAN6O43657 245 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 FURINP09958 794 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 SESN3P58005 492 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 MSMPQ1L6U9 139 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 LCE3BQ5TA77 95 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 OSTM1Q86WC4 334 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 RIOX2Q8IUF8 465 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 STK11IPQ8N1F8 1099 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 PLEKHO2Q8TD55 490 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 CAMKK2Q96RR4 588 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 JMJD8Q96S16 334 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 MTA3Q9BTC8 594 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 EPB41L1Q9H4G0 881 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 SMURF1Q9HCE7 757 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 SMARCA2P51531 1590 aa8.42□□□□□ -1.06
VMP1-215ENST00000592619 SLC12A8A0AV02 714 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 AKAP10O43572 662 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 FBXO21O94952 628 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 AMY2AP04746 511 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 ZBTB48P10074 688 aaPredicted RBP8.41□□□□□ -1.06
VMP1-215ENST00000592619 GNAT1P11488 350 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 AMY2BP19961 511 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 HOXA10P31260 410 aaPredicted RBP8.41□□□□□ -1.06
VMP1-215ENST00000592619 RAB27AP51159 221 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 JAM2P57087 298 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 PPP2R5AQ15172 486 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 RGL3Q3MIN7 710 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 OTOP3Q7RTS5 596 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 PASD1Q8IV76 773 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 ASIC4Q96FT7 647 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 YIPF4Q9BSR8 244 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 BSDC1Q9NW68 430 aaPredicted RBP8.41□□□□□ -1.06
VMP1-215ENST00000592619 BTG4Q9NY30 223 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 MARCH2Q9P0N8 246 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 GULP1Q9UBP9 304 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 EBF1Q9UH73 591 aa8.41□□□□□ -1.06
VMP1-215ENST00000592619 SHTN1A0MZ66 631 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 C22orf46C9J442 243 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 DYRK3O43781 588 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 DGKIO75912 1065 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 ZGLP1P0C6A0 271 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 FPR2P25090 351 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 ERVK-21P61565 698 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 IKZF1Q13422 519 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 INAVAQ3KP66 663 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 MROH9Q5TGP6 573 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 ARHGAP36Q6ZRI8 547 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 TEX2Q8IWB9 1127 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 SLC5A5Q92911 643 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 SMAD5Q99717 465 aaKnown RBP8.4□□□□□ -1.06
VMP1-215ENST00000592619 PCGF6Q9BYE7 350 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 CARS2Q9HA77 564 aaKnown RBP8.4□□□□□ -1.06
VMP1-215ENST00000592619 COA3Q9Y2R0 106 aaPredicted RBP8.4□□□□□ -1.06
VMP1-215ENST00000592619 SPO11Q9Y5K1 396 aa8.4□□□□□ -1.06
VMP1-215ENST00000592619 HMGXB3Q12766 1538 aa8.39□□□□□ -1.07
VMP1-215ENST00000592619 TNKSO95271 1327 aa8.39□□□□□ -1.07
VMP1-215ENST00000592619 TCRBV5S4A2TA0A5A2 114 aa8.39□□□□□ -1.07
VMP1-215ENST00000592619 H7C1D1 291 aa8.39□□□□□ -1.07
VMP1-215ENST00000592619 RTP1P59025 263 aa8.39□□□□□ -1.07
VMP1-215ENST00000592619 ZBTB46Q86UZ6 589 aa8.39□□□□□ -1.07
VMP1-215ENST00000592619 CBARPQ8N350 705 aaPredicted RBP8.39□□□□□ -1.07
VMP1-215ENST00000592619 ANKS4BQ8N8V4 417 aa8.39□□□□□ -1.07
VMP1-215ENST00000592619 TSR2Q969E8 191 aaKnown RBP8.39□□□□□ -1.07
VMP1-215ENST00000592619 CCDC136Q96JN2 1154 aa8.39□□□□□ -1.07
VMP1-215ENST00000592619 CDH19Q9H159 772 aa8.39□□□□□ -1.07
VMP1-215ENST00000592619 H2AFY2Q9P0M6 372 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms