RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 RRAGAQ7L523 313 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 MYOCDQ8IZQ8 938 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 GOLGA6L1Q8N7Z2 621 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 HAS1Q92839 578 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 MTMR8Q96EF0 704 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 NAP1L4Q99733 375 aaKnown RBP12.85□□□□□ -0.35
ZNF540-210ENST00000592533 NUDT12Q9BQG2 462 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 MMRN2Q9H8L6 949 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 TMEM51Q9NW97 253 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 COL4A3BPQ9Y5P4 624 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 KDM3AQ9Y4C1 1321 aa12.85□□□□□ -0.35
ZNF540-210ENST00000592533 AKR1B10O60218 316 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 GNA14O95837 355 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 COASYQ13057 564 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 EMBQ6PCB8 327 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 CAVIN3Q969G5 261 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 TLR10Q9BXR5 811 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 DEF6Q9H4E7 631 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 VAT1LQ9HCJ6 419 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 RRP15Q9Y3B9 282 aaKnown RBP12.84□□□□□ -0.35
ZNF540-210ENST00000592533 PCDHA2Q9Y5H9 948 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 SIPA1L1O43166 1804 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 MYO1CO00159 1063 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 PHACTR2O75167 634 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 NOL4O94818 638 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 UFL1O94874 794 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 MAGEA1P43355 309 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 ZNF543Q08ER8 600 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 NNTQ13423 1086 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 SWAP70Q9UH65 585 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 GGA1Q9UJY5 639 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 SERPING1P05155 500 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 EPB41P11171 864 aaKnown RBP12.84□□□□□ -0.35
ZNF540-210ENST00000592533 ECM1Q16610 540 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 MFSD14BQ5SR56 506 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 KLHDC7AQ5VTJ3 777 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 HAUS3Q68CZ6 603 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 COA7Q96BR5 231 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 GPR101Q96P66 508 aaPredicted RBP12.84□□□□□ -0.35
ZNF540-210ENST00000592533 NOX5Q96PH1 765 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 LRRC1Q9BTT6 524 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 NT5C3AQ9H0P0 336 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 JMJD4Q9H9V9 463 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 SALL4Q9UJQ4 1053 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 SUGT1Q9Y2Z0 365 aa12.84□□□□□ -0.35
ZNF540-210ENST00000592533 FRMPD2Q68DX3 1309 aaPredicted RBP12.83□□□□□ -0.35
ZNF540-210ENST00000592533 GOLGA6BA6NDN3 693 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 PPFIA4O75335 1185 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 EPHB4P54760 987 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 PRR5LQ6MZQ0 368 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 NFRKBQ6P4R8 1299 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 STIM2Q9P246 746 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
ZNF540-210ENST00000592533 FRMD3A2A2Y4 597 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
ZNF540-210ENST00000592533 ZMYND10O75800 440 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 ADRA2BP18089 450 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 RFC4P35249 363 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 TRIM59Q8IWR1 403 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 DDX25Q9UHL0 483 aaKnown RBP12.83□□□□□ -0.36
ZNF540-210ENST00000592533 DMGDHQ9UI17 866 aaKnown RBP12.83□□□□□ -0.36
ZNF540-210ENST00000592533 LCMT1Q9UIC8 334 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 DAGLAQ9Y4D2 1042 aa12.83□□□□□ -0.36
ZNF540-210ENST00000592533 TLR2O60603 784 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 TTLL1O95922 423 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 SLC9C1Q4G0N8 1177 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 FAM26FQ5R3K3 315 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 TRAPPC3LQ5T215 181 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 ALS2CLQ60I27 953 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 GSPT2Q8IYD1 628 aaKnown RBP12.82□□□□□ -0.36
ZNF540-210ENST00000592533 GLIS3Q8NEA6 775 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 RPGRQ92834 1020 aaKnown RBP12.82□□□□□ -0.36
ZNF540-210ENST00000592533 CUL5Q93034 780 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 ATP8B3O60423 1300 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 ADAMTSL1Q8N6G6 1762 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 GRID2IPA4D2P6 1211 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 BTNL10A8MVZ5 291 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 SLC1A4P43007 532 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 CACNA2D4Q7Z3S7 1137 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 ADGRF4Q8IZF3 695 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 HDAC7Q8WUI4 952 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 MBOAT7Q96N66 472 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 GLT8D2Q9H1C3 349 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 LUC7LQ9NQ29 371 aaKnown RBP12.82□□□□□ -0.36
ZNF540-210ENST00000592533 PANK4Q9NVE7 773 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 AIPL1Q9NZN9 384 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 PCDHGC5Q9Y5F6 944 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 GOLGA8KD6RF30 607 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 AKR1B1P15121 316 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 HOXA10P31260 410 aaPredicted RBP12.82□□□□□ -0.36
ZNF540-210ENST00000592533 GFPT1Q06210 699 aaPredicted RBP12.82□□□□□ -0.36
ZNF540-210ENST00000592533 NAB2Q15742 525 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 EZH2Q15910 746 aaKnown RBP12.82□□□□□ -0.36
ZNF540-210ENST00000592533 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 GPATCH4Q5T3I0 446 aaKnown RBP12.82□□□□□ -0.36
ZNF540-210ENST00000592533 SFMBT2Q5VUG0 894 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 PPP4R3CPQ6ZMV5 832 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 GBP6Q6ZN66 633 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms