RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 FPGSQ05932 587 aa31.27■■■□□ 2.6
SMAD4-213ENST00000591914 MFSD5Q6N075 450 aa31.27■■■□□ 2.6
SMAD4-213ENST00000591914 UPF3BQ9BZI7 483 aaKnown RBP31.27■■■□□ 2.6
SMAD4-213ENST00000591914 RTEL1Q9NZ71 1219 aa31.27■■■□□ 2.6
SMAD4-213ENST00000591914 SPDYE3A6NKU9 549 aa31.26■■■□□ 2.59
SMAD4-213ENST00000591914 FIBPO43427 364 aa31.26■■■□□ 2.59
SMAD4-213ENST00000591914 EPHB4P54760 987 aa31.26■■■□□ 2.59
SMAD4-213ENST00000591914 SEMA3FQ13275 785 aa31.26■■■□□ 2.59
SMAD4-213ENST00000591914 PFKFB3Q16875 520 aaPredicted RBP31.26■■■□□ 2.59
SMAD4-213ENST00000591914 KAT2BQ92831 832 aa31.26■■■□□ 2.59
SMAD4-213ENST00000591914 LAMA2P24043 3122 aaKnown RBP31.26■■■□□ 2.59
SMAD4-213ENST00000591914 PTPN11Q06124 597 aaPredicted RBP31.25■■■□□ 2.59
SMAD4-213ENST00000591914 SHHQ15465 462 aa31.25■■■□□ 2.59
SMAD4-213ENST00000591914 NTRK3Q16288 839 aa31.25■■■□□ 2.59
SMAD4-213ENST00000591914 HSDL1Q3SXM5 330 aa31.25■■■□□ 2.59
SMAD4-213ENST00000591914 C9orf50Q5SZB4 431 aa31.25■■■□□ 2.59
SMAD4-213ENST00000591914 LRCH3Q96II8 777 aa31.25■■■□□ 2.59
SMAD4-213ENST00000591914 SPATA33Q96N06 139 aa31.25■■■□□ 2.59
SMAD4-213ENST00000591914 PPP1R12CQ9BZL4 782 aa31.25■■■□□ 2.59
SMAD4-213ENST00000591914 TRMT13Q9NUP7 481 aaKnown RBP31.25■■■□□ 2.59
SMAD4-213ENST00000591914 PCDHA6Q9UN73 950 aa31.25■■■□□ 2.59
SMAD4-213ENST00000591914 PCDHA8Q9Y5H6 950 aa31.25■■■□□ 2.59
SMAD4-213ENST00000591914 SUPT20HL2P0C7V6 817 aa31.24■■■□□ 2.59
SMAD4-213ENST00000591914 SCG2P13521 617 aa31.24■■■□□ 2.59
SMAD4-213ENST00000591914 ADCY7P51828 1080 aa31.24■■■□□ 2.59
SMAD4-213ENST00000591914 HIPK3Q9H422 1215 aa31.24■■■□□ 2.59
SMAD4-213ENST00000591914 PRPF3O43395 683 aaKnown RBP31.23■■■□□ 2.59
SMAD4-213ENST00000591914 PPFIA4O75335 1185 aa31.23■■■□□ 2.59
SMAD4-213ENST00000591914 ANAPC15P60006 121 aa31.23■■■□□ 2.59
SMAD4-213ENST00000591914 FAM47CQ5HY64 1035 aa31.23■■■□□ 2.59
SMAD4-213ENST00000591914 NOC4LQ9BVI4 516 aaKnown RBP31.23■■■□□ 2.59
SMAD4-213ENST00000591914 GLT8D2Q9H1C3 349 aa31.23■■■□□ 2.59
SMAD4-213ENST00000591914 BCAS3Q9H6U6 928 aa31.23■■■□□ 2.59
SMAD4-213ENST00000591914 MLXIPQ9HAP2 919 aa31.23■■■□□ 2.59
SMAD4-213ENST00000591914 SMCO2A6NFE2 343 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 SORBS3O60504 671 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 F2P00734 622 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 IFNAR1P17181 557 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 CYP2C18P33260 490 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 NEDD9Q14511 834 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 PKN1Q16512 942 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 NLRX1Q86UT6 975 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 TMEM199Q8N511 208 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 PPP1R13LQ8WUF5 828 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 PHKBQ93100 1093 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 ZNF274Q96GC6 653 aaPredicted RBP31.22■■■□□ 2.59
SMAD4-213ENST00000591914 NCOA5Q9HCD5 579 aaKnown RBP31.22■■■□□ 2.59
SMAD4-213ENST00000591914 PDRG1Q9NUG6 133 aa31.22■■■□□ 2.59
SMAD4-213ENST00000591914 ITGB5P18084 799 aa31.21■■■□□ 2.59
SMAD4-213ENST00000591914 CCT2P78371 535 aaKnown RBP31.21■■■□□ 2.59
SMAD4-213ENST00000591914 SESTD1Q86VW0 696 aa31.21■■■□□ 2.59
SMAD4-213ENST00000591914 GPRASP2Q96D09 838 aa31.21■■■□□ 2.59
SMAD4-213ENST00000591914 SENP7Q9BQF6 1050 aa31.21■■■□□ 2.59
SMAD4-213ENST00000591914 RNF26Q9BY78 433 aaPredicted RBP31.21■■■□□ 2.59
SMAD4-213ENST00000591914 EHMT1Q9H9B1 1298 aa31.21■■■□□ 2.59
SMAD4-213ENST00000591914 UMODL1Q5DID0 1318 aa31.21■■■□□ 2.59
SMAD4-213ENST00000591914 EIF5BO60841 1220 aaKnown RBP31.2■■■□□ 2.59
SMAD4-213ENST00000591914 FOSP01100 380 aaPredicted RBP31.2■■■□□ 2.59
SMAD4-213ENST00000591914 ZNF286BP0CG31 522 aa31.2■■■□□ 2.59
SMAD4-213ENST00000591914 CSF2RAP15509 400 aa31.2■■■□□ 2.59
SMAD4-213ENST00000591914 CLK2P49760 499 aaKnown RBP31.2■■■□□ 2.59
SMAD4-213ENST00000591914 PPIGQ13427 754 aaKnown RBP eCLIP31.2■■■□□ 2.59
SMAD4-213ENST00000591914 METTL7BQ6UX53 244 aa31.2■■■□□ 2.59
SMAD4-213ENST00000591914 IL17RAQ96F46 866 aa31.2■■■□□ 2.59
SMAD4-213ENST00000591914 KATNAL1Q9BW62 490 aa31.2■■■□□ 2.59
SMAD4-213ENST00000591914 UBIAD1Q9Y5Z9 338 aa31.2■■■□□ 2.59
SMAD4-213ENST00000591914 ESYT2A0FGR8 921 aa31.19■■■□□ 2.58
SMAD4-213ENST00000591914 HAS3O00219 553 aa31.19■■■□□ 2.58
SMAD4-213ENST00000591914 CHMP4BP1P59074 171 aa31.19■■■□□ 2.58
SMAD4-213ENST00000591914 GPR153Q6NV75 609 aa31.19■■■□□ 2.58
SMAD4-213ENST00000591914 CDHR1Q96JP9 859 aa31.19■■■□□ 2.58
SMAD4-213ENST00000591914 CYP2C9P11712 490 aa31.18■■■□□ 2.58
SMAD4-213ENST00000591914 PSEN2P49810 448 aa31.18■■■□□ 2.58
SMAD4-213ENST00000591914 AP3B2Q13367 1082 aa31.18■■■□□ 2.58
SMAD4-213ENST00000591914 CYFIP1Q7L576 1253 aa31.18■■■□□ 2.58
SMAD4-213ENST00000591914 ZMYND12Q9H0C1 365 aa31.18■■■□□ 2.58
SMAD4-213ENST00000591914 DOCK5Q9H7D0 1870 aa31.18■■■□□ 2.58
SMAD4-213ENST00000591914 AKAP17AQ02040 695 aaKnown RBP31.17■■■□□ 2.58
SMAD4-213ENST00000591914 MFSD10Q14728 455 aa31.17■■■□□ 2.58
SMAD4-213ENST00000591914 C16orf59Q7L2K0 433 aa31.17■■■□□ 2.58
SMAD4-213ENST00000591914 CCDC12Q8WUD4 166 aaPredicted RBP31.17■■■□□ 2.58
SMAD4-213ENST00000591914 LARP6Q9BRS8 491 aaKnown RBP31.17■■■□□ 2.58
SMAD4-213ENST00000591914 C16orf70Q9BSU1 422 aa31.17■■■□□ 2.58
SMAD4-213ENST00000591914 SLC26A6Q9BXS9 759 aa31.17■■■□□ 2.58
SMAD4-213ENST00000591914 ANO3Q9BYT9 981 aa31.17■■■□□ 2.58
SMAD4-213ENST00000591914 WNT8AQ9H1J5 351 aa31.17■■■□□ 2.58
SMAD4-213ENST00000591914 MTMR1Q13613 665 aa31.16■■■□□ 2.58
SMAD4-213ENST00000591914 KIAA0753Q2KHM9 967 aa31.16■■■□□ 2.58
SMAD4-213ENST00000591914 GIMAP8Q8ND71 665 aaPredicted RBP31.16■■■□□ 2.58
SMAD4-213ENST00000591914 PGBD1Q96JS3 809 aa31.16■■■□□ 2.58
SMAD4-213ENST00000591914 JADE2Q9NQC1 790 aa31.16■■■□□ 2.58
SMAD4-213ENST00000591914 TMEM260Q9NX78 707 aa31.16■■■□□ 2.58
SMAD4-213ENST00000591914 NOP56O00567 594 aaKnown RBP31.15■■■□□ 2.58
SMAD4-213ENST00000591914 PPFIA3O75145 1194 aa31.15■■■□□ 2.58
SMAD4-213ENST00000591914 KCNA2P16389 499 aa31.15■■■□□ 2.58
SMAD4-213ENST00000591914 SREBF1P36956 1147 aa31.15■■■□□ 2.58
SMAD4-213ENST00000591914 CCL23P55773 120 aa31.15■■■□□ 2.58
SMAD4-213ENST00000591914 GDF6Q6KF10 455 aaPredicted RBP31.15■■■□□ 2.58
SMAD4-213ENST00000591914 C7orf31Q8N865 590 aa31.15■■■□□ 2.58
SMAD4-213ENST00000591914 RNPC3Q96LT9 517 aaKnown RBP31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms