RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ASTN1O14525 1302 aa11.06□□□□□ -0.64
BRCA1-226ENST00000591534 GRXCR1A8MXD5 290 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 NMT2O60551 498 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 CALML3P27482 149 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 SNAP25P60880 206 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 PTPN11Q06124 597 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-226ENST00000591534 PPP2R5BQ15173 497 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 AAK1Q2M2I8 961 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 GPATCH4Q5T3I0 446 aaKnown RBP11.05□□□□□ -0.64
BRCA1-226ENST00000591534 MFSD6Q6ZSS7 791 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 OR6J1Q8NGC5 347 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 SCFD2Q8WU76 684 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 PRUNE2Q8WUY3 3088 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 TMEM47Q9BQJ4 181 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 NOD1Q9Y239 953 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 TNKSO95271 1327 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 ZMYM6O95789 1325 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 CDH23Q9H251 3354 aa11.05□□□□□ -0.64
BRCA1-226ENST00000591534 RBM47A0AV96 593 aaKnown RBP11.04□□□□□ -0.64
BRCA1-226ENST00000591534 KIF28PB7ZC32 967 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 FGAP02671 866 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 MYL3P08590 195 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
BRCA1-226ENST00000591534 SLC16A2P36021 539 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 PSMC6P62333 389 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 PURAQ00577 322 aaKnown RBP11.04□□□□□ -0.64
BRCA1-226ENST00000591534 BFSP2Q13515 415 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 HDAC1Q13547 482 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-226ENST00000591534 TTLL4Q14679 1199 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 FAM47CQ5HY64 1035 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 NFRKBQ6P4R8 1299 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 BLOC1S3Q6QNY0 202 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 RNF19BQ6ZMZ0 732 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 CENPQQ7L2Z9 268 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-226ENST00000591534 CCDC155Q8N6L0 562 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 RGS22Q8NE09 1264 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 EPS8L1Q8TE68 723 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 ESR2Q92731 530 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 ASB2Q96Q27 587 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 NKX2-4Q9H2Z4 354 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 CXXC1Q9P0U4 656 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-226ENST00000591534 GRIN2DO15399 1336 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 WDR19Q8NEZ3 1342 aa11.04□□□□□ -0.64
BRCA1-226ENST00000591534 NFIBO00712 420 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 HSPD1P10809 573 aaKnown RBP11.03□□□□□ -0.64
BRCA1-226ENST00000591534 PDHBP11177 359 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 TMEM67Q5HYA8 995 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 TTBK2Q6IQ55 1244 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 B4GALNT3Q6L9W6 998 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 IQCA1Q86XH1 822 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 MCF2L2Q86YR7 1114 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 USP38Q8NB14 1042 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 PHOSPHO2Q8TCD6 241 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 SLC9A7Q96T83 725 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 INCENPQ9NQS7 918 aa11.03□□□□□ -0.64
BRCA1-226ENST00000591534 FRMPD2Q68DX3 1309 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-226ENST00000591534 MYH4Q9Y623 1939 aa11.02□□□□□ -0.65
BRCA1-226ENST00000591534 ZNF213O14771 459 aa11.02□□□□□ -0.65
BRCA1-226ENST00000591534 FOXP2O15409 715 aa11.02□□□□□ -0.65
BRCA1-226ENST00000591534 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.65
BRCA1-226ENST00000591534 TXNP10599 105 aaKnown RBP11.02□□□□□ -0.65
BRCA1-226ENST00000591534 PDE1AP54750 535 aa11.02□□□□□ -0.65
BRCA1-226ENST00000591534 RPS6P62753 249 aaKnown RBP11.02□□□□□ -0.65
BRCA1-226ENST00000591534 ZNF543Q08ER8 600 aa11.02□□□□□ -0.65
BRCA1-226ENST00000591534 CCDC85BQ15834 202 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-226ENST00000591534 VPS53Q5VIR6 699 aa11.02□□□□□ -0.65
BRCA1-226ENST00000591534 DGKHQ86XP1 1220 aa11.02□□□□□ -0.65
BRCA1-226ENST00000591534 FTOQ9C0B1 505 aaKnown RBP eCLIP11.02□□□□□ -0.65
BRCA1-226ENST00000591534 LNPKQ9C0E8 428 aa11.02□□□□□ -0.65
BRCA1-226ENST00000591534 WNT8AQ9H1J5 351 aa11.02□□□□□ -0.65
BRCA1-226ENST00000591534 TRMT13Q9NUP7 481 aaKnown RBP11.02□□□□□ -0.65
BRCA1-226ENST00000591534 TSR3Q9UJK0 312 aaKnown RBP11.02□□□□□ -0.65
BRCA1-226ENST00000591534 UMODL1Q5DID0 1318 aa11.02□□□□□ -0.65
BRCA1-226ENST00000591534 EIF5BO60841 1220 aaKnown RBP11.01□□□□□ -0.65
BRCA1-226ENST00000591534 BAIAP3O94812 1187 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 CYP2C9P11712 490 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 EDNRBP24530 442 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 NBPF20Q3BBV1 942 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 SLC30A10Q6XR72 485 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 DEFB128Q7Z7B8 93 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 SMC5Q8IY18 1101 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 ADAMTS19Q8TE59 1207 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 NSUN6Q8TEA1 469 aaKnown RBP11.01□□□□□ -0.65
BRCA1-226ENST00000591534 CLEC4DQ8WXI8 215 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 RILPL2Q969X0 211 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 SCLYQ96I15 445 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 FAM227BQ96M60 508 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 PURBQ96QR8 312 aaKnown RBP11.01□□□□□ -0.65
BRCA1-226ENST00000591534 IWS1Q96ST2 819 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 KAT14Q9H8E8 782 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 YBX2Q9Y2T7 364 aaKnown RBP11.01□□□□□ -0.65
BRCA1-226ENST00000591534 ABCB11O95342 1321 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 CCDC171Q6TFL3 1326 aa11.01□□□□□ -0.65
BRCA1-226ENST00000591534 SPTBN5Q9NRC6 3674 aaKnown RBP11□□□□□ -0.65
BRCA1-226ENST00000591534 POM121CA8CG34 1229 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 HIP1O00291 1037 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 SNHG28P0DPA3 235 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 CASTP20810 708 aaKnown RBP11□□□□□ -0.65
BRCA1-226ENST00000591534 KCNJ6P48051 423 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 RABGGTBP53611 331 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms