RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 UBA5Q9GZZ9 404 aa7.42□□□□□ -1.22
VPS4B-205ENST00000591383 TXNRD2Q9NNW7 524 aa7.42□□□□□ -1.22
VPS4B-205ENST00000591383 BRPF3Q9ULD4 1205 aa7.42□□□□□ -1.22
VPS4B-205ENST00000591383 PRR12Q9ULL5 1215 aa7.42□□□□□ -1.22
VPS4B-205ENST00000591383 KLRF2D3W0D1 207 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 GPR25O00155 361 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 VWA5AO00534 786 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 TNPO2O14787 897 aaKnown RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 TREHO43280 583 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 FKTNO75072 461 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 CNMDO75829 334 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 GNRH1P01148 92 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 BCRP11274 1271 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 LBX1P52954 281 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 CCT2P78371 535 aaKnown RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 CCNA1P78396 465 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 SP3Q02447 781 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 TROAPQ12815 778 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 KIF22Q14807 665 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 ANKRD1Q15327 319 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 CDC37Q16543 378 aaPredicted RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 TSNAXIP1Q2TAA8 658 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 USH1GQ495M9 461 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 TBCELQ5QJ74 424 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 TMTC3Q6ZXV5 915 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 CYP2U1Q7Z449 544 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 NCAPG2Q86XI2 1143 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 CMTR1Q8N1G2 835 aaKnown RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 TMTC2Q8N394 836 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 MB21D1Q8N884 522 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 PRPF38AQ8NAV1 312 aaKnown RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 GPRC5AQ8NFJ5 357 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 ZNF296Q8WUU4 475 aaPredicted RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 C2orf49Q9BVC5 232 aaPredicted RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 TEX13BQ9BXU2 312 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 ARHGAP39Q9C0H5 1083 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 SPATC1LQ9H0A9 340 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 NCOA5Q9HCD5 579 aaKnown RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 RAVER2Q9HCJ3 691 aaKnown RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 VAT1LQ9HCJ6 419 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 SCHIP1Q9P0W5 487 aaPredicted RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 BTBD7Q9P203 1132 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 SEC63Q9UGP8 760 aaKnown RBP7.41□□□□□ -1.22
VPS4B-205ENST00000591383 MAD2L2Q9UI95 211 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 CCPG1Q9ULG6 757 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 RABGAP1Q9Y3P9 1069 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 CNTNAP5Q8WYK1 1306 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 NID2Q14112 1375 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 LRRC37A2A6NM11 1700 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 PLXNA1Q9UIW2 1896 aa7.41□□□□□ -1.22
VPS4B-205ENST00000591383 hCG_1642624A0A1W2PR95 340 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 TNFRSF10BO14763 440 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 CPLX1O14810 134 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 PPFIA3O75145 1194 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 LARGE1O95461 756 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 ALAS1P13196 640 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 EIF1AXP47813 144 aaKnown RBP7.4□□□□□ -1.22
VPS4B-205ENST00000591383 GNAQP50148 359 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 FCGRTP55899 365 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 TMEM132BQ14DG7 1078 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 MTFR1Q15390 333 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 QRICH1Q2TAL8 776 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 COX20Q5RI15 118 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 C17orf99Q6UX52 265 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 LBX2Q6XYB7 198 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 SLC9A9Q8IVB4 645 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 ADGRF4Q8IZF3 695 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 RRP36Q96EU6 259 aaKnown RBP7.4□□□□□ -1.22
VPS4B-205ENST00000591383 IL17RAQ96F46 866 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 ERO1AQ96HE7 468 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 CITED4Q96RK1 184 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 KIF2CQ99661 725 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 CFHR5Q9BXR6 569 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 MOV10L1Q9BXT6 1211 aaKnown RBP7.4□□□□□ -1.22
VPS4B-205ENST00000591383 PORCNQ9H237 461 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 EFCC1Q9HA90 598 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 SLC38A10Q9HBR0 1119 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 RNF146Q9NTX7 359 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 RBM28Q9NW13 759 aaKnown RBP7.4□□□□□ -1.22
VPS4B-205ENST00000591383 HOXC10Q9NYD6 342 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 MORF4L1Q9UBU8 362 aa7.4□□□□□ -1.22
VPS4B-205ENST00000591383 LCTP09848 1927 aa7.4□□□□□ -1.23
VPS4B-205ENST00000591383 A6NJY4 79 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 FZD6O60353 706 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 PLA2G6O60733 806 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 ICAM1P05362 532 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 CDC27P30260 824 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 MAPK4P31152 587 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 COPB2P35606 906 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 ADD1P35611 737 aaKnown RBP7.39□□□□□ -1.23
VPS4B-205ENST00000591383 PSMC4P43686 418 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 RPIAP49247 311 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 RCAN1P53805 252 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 SMTNP53814 917 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 LACTBP83111 547 aaPredicted RBP7.39□□□□□ -1.23
VPS4B-205ENST00000591383 MRPL58Q14197 206 aaKnown RBP7.39□□□□□ -1.23
VPS4B-205ENST00000591383 DSC3Q14574 896 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 SLC35G1Q2M3R5 365 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 PPP1R26Q5T8A7 1209 aaPredicted RBP7.39□□□□□ -1.23
VPS4B-205ENST00000591383 ALKBH2Q6NS38 261 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms