RNA–Protein interactions for RNA: ENST00000590445.5

GCDH-210, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 4

Gene GCDH, Length 496 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-210ENST00000590445 IL31RAQ8NI17 732 aa18.43■□□□□ 0.54
GCDH-210ENST00000590445 GPKOWQ92917 476 aaPredicted RBP eCLIP18.43■□□□□ 0.54
GCDH-210ENST00000590445 PSTPIP2Q9H939 334 aa18.43■□□□□ 0.54
GCDH-210ENST00000590445 SH2B1Q9NRF2 756 aaPredicted RBP18.43■□□□□ 0.54
GCDH-210ENST00000590445 TBX21Q9UL17 535 aa18.43■□□□□ 0.54
GCDH-210ENST00000590445 GRIN2DO15399 1336 aa18.43■□□□□ 0.54
GCDH-210ENST00000590445 STXBP3O00186 592 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 MEIS2O14770 477 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 STAM2O75886 525 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 MCM2P49736 904 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 PSMC6P62333 389 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 ARHGAP1Q07960 439 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 LAMC2Q13753 1193 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 PKN1Q16512 942 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 LRIT3Q3SXY7 679 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 USP17L6PQ6QN14 398 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 AFG1LQ8WV93 481 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 EMID1Q96A84 441 aaPredicted RBP18.42■□□□□ 0.54
GCDH-210ENST00000590445 STK36Q9NRP7 1315 aa18.42■□□□□ 0.54
GCDH-210ENST00000590445 RGS20O76081 388 aa18.41■□□□□ 0.54
GCDH-210ENST00000590445 TIMP1P01033 207 aa18.41■□□□□ 0.54
GCDH-210ENST00000590445 CD4P01730 458 aa18.41■□□□□ 0.54
GCDH-210ENST00000590445 TGFB3P10600 412 aa18.41■□□□□ 0.54
GCDH-210ENST00000590445 ITGB8P26012 769 aa18.41■□□□□ 0.54
GCDH-210ENST00000590445 GNPTABQ3T906 1256 aa18.41■□□□□ 0.54
GCDH-210ENST00000590445 XRRA1Q6P2D8 792 aa18.41■□□□□ 0.54
GCDH-210ENST00000590445 FAM177A1Q8N128 213 aaPredicted RBP18.41■□□□□ 0.54
GCDH-210ENST00000590445 CCDC148Q8NFR7 591 aa18.41■□□□□ 0.54
GCDH-210ENST00000590445 RIC8AQ9NPQ8 531 aa18.41■□□□□ 0.54
GCDH-210ENST00000590445 SH3GLB2Q9NR46 395 aa18.41■□□□□ 0.54
GCDH-210ENST00000590445 ESYT2A0FGR8 921 aa18.4■□□□□ 0.54
GCDH-210ENST00000590445 LARGE1O95461 756 aa18.4■□□□□ 0.54
GCDH-210ENST00000590445 MMP3P08254 477 aa18.4■□□□□ 0.54
GCDH-210ENST00000590445 ADCY7P51828 1080 aa18.4■□□□□ 0.54
GCDH-210ENST00000590445 DHX37Q8IY37 1157 aaKnown RBP18.4■□□□□ 0.54
GCDH-210ENST00000590445 WASF1Q92558 559 aa18.4■□□□□ 0.54
GCDH-210ENST00000590445 SCN10AQ9Y5Y9 1956 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 SMCO2A6NFE2 343 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 GNA11P29992 359 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 MRPS9P82933 396 aaKnown RBP18.39■□□□□ 0.53
GCDH-210ENST00000590445 FPGSQ05932 587 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 DGKDQ16760 1214 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 PCNX4Q63HM2 1172 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 MCTP2Q6DN12 878 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 NFRKBQ6P4R8 1299 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 NECAB1Q8N987 351 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 PPTC7Q8NI37 304 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 ZMYND12Q9H0C1 365 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 C6orf50Q9HD87 102 aa18.39■□□□□ 0.53
GCDH-210ENST00000590445 SPDYE3A6NKU9 549 aa18.38■□□□□ 0.53
GCDH-210ENST00000590445 SOX1O00570 391 aaPredicted RBP18.38■□□□□ 0.53
GCDH-210ENST00000590445 B4GALT4O60513 344 aa18.38■□□□□ 0.53
GCDH-210ENST00000590445 FOSP01100 380 aaPredicted RBP18.38■□□□□ 0.53
GCDH-210ENST00000590445 SUPT20HL2P0C7V6 817 aa18.38■□□□□ 0.53
GCDH-210ENST00000590445 XBP1P17861 261 aa18.38■□□□□ 0.53
GCDH-210ENST00000590445 PTPN11Q06124 597 aaPredicted RBP18.38■□□□□ 0.53
GCDH-210ENST00000590445 NBPF20Q3BBV1 942 aa18.38■□□□□ 0.53
GCDH-210ENST00000590445 CELF3Q5SZQ8 465 aaKnown RBP18.38■□□□□ 0.53
GCDH-210ENST00000590445 MFSD5Q6N075 450 aa18.38■□□□□ 0.53
GCDH-210ENST00000590445 BICD2Q8TD16 824 aa18.38■□□□□ 0.53
GCDH-210ENST00000590445 INPP4AQ96PE3 977 aaPredicted RBP18.38■□□□□ 0.53
GCDH-210ENST00000590445 LLPHQ9BRT6 129 aaKnown RBP18.38■□□□□ 0.53
GCDH-210ENST00000590445 TRPV6Q9H1D0 765 aa18.38■□□□□ 0.53
GCDH-210ENST00000590445 EHMT1Q9H9B1 1298 aa18.38■□□□□ 0.53
GCDH-210ENST00000590445 PPFIA3O75145 1194 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 CTDNEP1O95476 244 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 GGPS1O95749 300 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 UBA1P22314 1058 aaKnown RBP18.37■□□□□ 0.53
GCDH-210ENST00000590445 ICAM3P32942 547 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 AP3B2Q13367 1082 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 PPIGQ13427 754 aaKnown RBP eCLIP18.37■□□□□ 0.531e-6■■□□□ 14.2
GCDH-210ENST00000590445 SHHQ15465 462 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 FAM47CQ5HY64 1035 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 MYSM1Q5VVJ2 828 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 TMEM199Q8N511 208 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 ZFP91Q96JP5 570 aaPredicted RBP18.37■□□□□ 0.53
GCDH-210ENST00000590445 SPATA33Q96N06 139 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 HIPK3Q9H422 1215 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 RTEL1Q9NZ71 1219 aa18.37■□□□□ 0.53
GCDH-210ENST00000590445 SPATA31C2B4DYI2 1134 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 FIBPO43427 364 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 SP2Q02086 613 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 NEDD9Q14511 834 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 UBE2SQ16763 222 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 GALNT17Q6IS24 598 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 GPR153Q6NV75 609 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 NLRX1Q86UT6 975 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 NSUN7Q8NE18 718 aaKnown RBP18.36■□□□□ 0.53
GCDH-210ENST00000590445 KATNAL1Q9BW62 490 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 PPP1R12CQ9BZL4 782 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 MLXIPQ9HAP2 919 aa18.36■□□□□ 0.53
GCDH-210ENST00000590445 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
GCDH-210ENST00000590445 MYH7BA7E2Y1 1941 aa18.35■□□□□ 0.53
GCDH-210ENST00000590445 PPFIA4O75335 1185 aa18.35■□□□□ 0.53
GCDH-210ENST00000590445 HOXD8P13378 290 aaPredicted RBP18.35■□□□□ 0.53
GCDH-210ENST00000590445 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
GCDH-210ENST00000590445 NLRP5P59047 1200 aa18.35■□□□□ 0.53
GCDH-210ENST00000590445 C9orf50Q5SZB4 431 aa18.35■□□□□ 0.53
GCDH-210ENST00000590445 CCDC83Q8IWF9 413 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms