RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 CCDC144BQ3MJ40 725 aa13.69□□□□□ -0.22
APOC1-206ENST00000590334 TTC38Q5R3I4 469 aa13.69□□□□□ -0.22
APOC1-206ENST00000590334 EEPD1Q7L9B9 569 aa13.69□□□□□ -0.22
APOC1-206ENST00000590334 ARMC5Q96C12 935 aa13.69□□□□□ -0.22
APOC1-206ENST00000590334 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
APOC1-206ENST00000590334 KCNH7Q9NS40 1196 aa13.69□□□□□ -0.22
APOC1-206ENST00000590334 DDX25Q9UHL0 483 aaKnown RBP13.69□□□□□ -0.22
APOC1-206ENST00000590334 ZHX1Q9UKY1 873 aaPredicted RBP13.69□□□□□ -0.22
APOC1-206ENST00000590334 TBX3O15119 743 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 SEPT4O43236 478 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 SLC37A4O43826 429 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 ARIH2O95376 493 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 ARP10275 920 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 AKR1A1P14550 325 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 TTLL4Q14679 1199 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 DUSP28Q4G0W2 176 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 PRR16Q569H4 304 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 SEPT14Q6ZU15 432 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 PLA2G4DQ86XP0 818 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 ETNPPLQ8TBG4 499 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 SENP7Q9BQF6 1050 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 AGO4Q9HCK5 861 aaKnown RBP13.68□□□□□ -0.22
APOC1-206ENST00000590334 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
APOC1-206ENST00000590334 KCNMB3Q9NPA1 279 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.68□□□□□ -0.22
APOC1-206ENST00000590334 DDX41Q9UJV9 622 aaKnown RBP13.68□□□□□ -0.22
APOC1-206ENST00000590334 FAM184BQ9ULE4 1060 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 PCDHB6Q9Y5E3 794 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
APOC1-206ENST00000590334 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.67□□□□□ -0.22
APOC1-206ENST00000590334 NKRFO15226 690 aaKnown RBP eCLIP13.67□□□□□ -0.22
APOC1-206ENST00000590334 MSH4O15457 936 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 ADCY6O43306 1168 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 NEMFO60524 1076 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 TXNP10599 105 aaKnown RBP13.67□□□□□ -0.22
APOC1-206ENST00000590334 KCNA2P16389 499 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 CCND3P30281 292 aaPredicted RBP13.67□□□□□ -0.22
APOC1-206ENST00000590334 ADCYAP1R1P41586 468 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 SP2Q02086 613 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 TNFAIP2Q03169 654 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 NBR1Q14596 966 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 ATL3Q6DD88 541 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 C4orf32Q8N8J7 132 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 GIMAP8Q8ND71 665 aaPredicted RBP13.67□□□□□ -0.22
APOC1-206ENST00000590334 SLC5A5Q92911 643 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 ZNF333Q96JL9 665 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 MCOLN1Q9GZU1 580 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 CHMP5Q9NZZ3 219 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 GNEQ9Y223 722 aaKnown RBP13.67□□□□□ -0.22
APOC1-206ENST00000590334 Q9Y3F1 56 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 BRCA2P51587 3418 aa13.67□□□□□ -0.22
APOC1-206ENST00000590334 NFASCO94856 1347 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 IPO5O00410 1097 aaKnown RBP13.66□□□□□ -0.22
APOC1-206ENST00000590334 LAD1O00515 517 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 DHX15O43143 795 aaKnown RBP13.66□□□□□ -0.22
APOC1-206ENST00000590334 MSCO60682 206 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 ATP9AO75110 1047 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 DUSP11O75319 330 aaKnown RBP13.66□□□□□ -0.22
APOC1-206ENST00000590334 SMPD1P17405 629 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 ATP2B1P20020 1258 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 UBA1P22314 1058 aaKnown RBP13.66□□□□□ -0.22
APOC1-206ENST00000590334 MCM7P33993 719 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 NKX3-2P78367 333 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 ZNF174Q15697 407 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 LY6KQ17RY6 165 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 TMEM63BQ5T3F8 832 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 FOXD4L5Q5VV16 416 aaPredicted RBP13.66□□□□□ -0.22
APOC1-206ENST00000590334 FAM173BQ6P4H8 233 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 FOXD4L4Q8WXT5 416 aaPredicted RBP13.66□□□□□ -0.22
APOC1-206ENST00000590334 HAS1Q92839 578 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 EMID1Q96A84 441 aaPredicted RBP13.66□□□□□ -0.22
APOC1-206ENST00000590334 FAM20AQ96MK3 541 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 MTMR9Q96QG7 549 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 RIT2Q99578 217 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 ZNF577Q9BSK1 485 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 PAK6Q9NQU5 681 aaPredicted RBP13.66□□□□□ -0.22
APOC1-206ENST00000590334 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
APOC1-206ENST00000590334 MORC2Q9Y6X9 1032 aaPredicted RBP13.66□□□□□ -0.22
APOC1-206ENST00000590334 DNAH12Q6ZR08 3092 aa13.65□□□□□ -0.22
APOC1-206ENST00000590334 CCL5P13501 91 aa13.65□□□□□ -0.22
APOC1-206ENST00000590334 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
APOC1-206ENST00000590334 NEDD9Q14511 834 aa13.65□□□□□ -0.22
APOC1-206ENST00000590334 CALCRLQ16602 461 aa13.65□□□□□ -0.22
APOC1-206ENST00000590334 CELF3Q5SZQ8 465 aaKnown RBP13.65□□□□□ -0.22
APOC1-206ENST00000590334 LHX8Q68G74 356 aa13.65□□□□□ -0.22
APOC1-206ENST00000590334 SLFN12Q8IYM2 578 aa13.65□□□□□ -0.22
APOC1-206ENST00000590334 ZNF396Q96N95 335 aaPredicted RBP13.65□□□□□ -0.22
APOC1-206ENST00000590334 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.65□□□□□ -0.226e-8■□□□□ 9.9
APOC1-206ENST00000590334 UNC93B1Q9H1C4 597 aa13.65□□□□□ -0.22
APOC1-206ENST00000590334 TMEM60Q9H2L4 133 aa13.65□□□□□ -0.22
APOC1-206ENST00000590334 TBC1D22BQ9NU19 505 aa13.65□□□□□ -0.22
APOC1-206ENST00000590334 POLR3EQ9NVU0 708 aa13.65□□□□□ -0.22
APOC1-206ENST00000590334 DDX20Q9UHI6 824 aaKnown RBP13.65□□□□□ -0.22
APOC1-206ENST00000590334 POTEFA5A3E0 1075 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 PSMD10O75832 226 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
APOC1-206ENST00000590334 BMP15O95972 392 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 GH1P01241 217 aa13.64□□□□□ -0.23
APOC1-206ENST00000590334 CNGA1P29973 690 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms