RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 PCDHA6Q9UN73 950 aa17.36■□□□□ 0.37
MBD1-222ENST00000590208 PCDHA8Q9Y5H6 950 aa17.36■□□□□ 0.37
MBD1-222ENST00000590208 GCFC2P16383 781 aaKnown RBP17.36■□□□□ 0.37
MBD1-222ENST00000590208 CALML3P27482 149 aa17.36■□□□□ 0.37
MBD1-222ENST00000590208 CENPPQ6IPU0 288 aa17.36■□□□□ 0.37
MBD1-222ENST00000590208 ARFGAP2Q8N6H7 521 aa17.36■□□□□ 0.37
MBD1-222ENST00000590208 C1orf131Q8NDD1 294 aaKnown RBP17.36■□□□□ 0.37
MBD1-222ENST00000590208 CCDC47Q96A33 483 aaKnown RBP17.36■□□□□ 0.37
MBD1-222ENST00000590208 NOVA2Q9UNW9 492 aaKnown RBP17.36■□□□□ 0.37
MBD1-222ENST00000590208 DUOX1Q9NRD9 1551 aa17.35■□□□□ 0.37
MBD1-222ENST00000590208 KCNMA1Q12791 1236 aa17.35■□□□□ 0.37
MBD1-222ENST00000590208 PPP2R5AQ15172 486 aa17.35■□□□□ 0.37
MBD1-222ENST00000590208 MAN2A1Q16706 1144 aa17.35■□□□□ 0.37
MBD1-222ENST00000590208 DNAAF5Q86Y56 855 aa17.35■□□□□ 0.37
MBD1-222ENST00000590208 USP38Q8NB14 1042 aa17.35■□□□□ 0.37
MBD1-222ENST00000590208 FAXDC2Q96IV6 333 aa17.35■□□□□ 0.37
MBD1-222ENST00000590208 CLNS1AP54105 237 aaKnown RBP17.35■□□□□ 0.37
MBD1-222ENST00000590208 MEI1Q5TIA1 1274 aa17.35■□□□□ 0.37
MBD1-222ENST00000590208 CCDC84Q86UT8 332 aaPredicted RBP17.35■□□□□ 0.37
MBD1-222ENST00000590208 GLIS3Q8NEA6 775 aa17.35■□□□□ 0.37
MBD1-222ENST00000590208 UBLCP1Q8WVY7 318 aaPredicted RBP17.35■□□□□ 0.37
MBD1-222ENST00000590208 KANSL2Q9H9L4 492 aa17.35■□□□□ 0.37
MBD1-222ENST00000590208 ACCSLQ4AC99 568 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 DYMQ7RTS9 669 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 CACNA2D3Q8IZS8 1091 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 MDM1Q8TC05 714 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 TBC1D5Q92609 795 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 TBC1D31Q96DN5 1066 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 C7orf25Q9BPX7 421 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.34■□□□□ 0.37
MBD1-222ENST00000590208 AP1M1Q9BXS5 423 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 ISCUQ9H1K1 167 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 NEBLO76041 1014 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 CYP2D6P10635 497 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 MRPL12P52815 198 aaKnown RBP17.34■□□□□ 0.37
MBD1-222ENST00000590208 NAB2Q15742 525 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 SLC24A3Q9HC58 644 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 TCP11L1Q9NUJ3 509 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 FBXL5Q9UKA1 691 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 SRRM3A6NNA2 597 aaPredicted RBP17.34■□□□□ 0.37
MBD1-222ENST00000590208 M0R2N6 131 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 KCNK3O14649 394 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 MYBP10242 640 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 EZRP15311 586 aaKnown RBP17.34■□□□□ 0.37
MBD1-222ENST00000590208 TECP42680 631 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 MAGOHP61326 146 aaKnown RBP17.34■□□□□ 0.37
MBD1-222ENST00000590208 LRRC41Q15345 812 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 KIAA0753Q2KHM9 967 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 MAGOHBQ96A72 148 aaKnown RBP17.34■□□□□ 0.37
MBD1-222ENST00000590208 TMOD3Q9NYL9 352 aa17.34■□□□□ 0.37
MBD1-222ENST00000590208 MYH3P11055 1940 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 TNS2Q63HR2 1409 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 A0A087X0T9 212 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 SSU72P8A0A1W2PR75 194 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 GRID2IPA4D2P6 1211 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 FAM228BP0C875 321 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 GYG1P46976 350 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 PPP2R2AP63151 447 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 TNNC1P63316 161 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 CNNM4Q6P4Q7 775 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 HVCN1Q96D96 273 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 IQCDQ96DY2 449 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 ADAMTS1Q9UHI8 967 aa17.33■□□□□ 0.37
MBD1-222ENST00000590208 SLC9C1Q4G0N8 1177 aa17.33■□□□□ 0.36
MBD1-222ENST00000590208 LRIG3Q6UXM1 1119 aa17.33■□□□□ 0.36
MBD1-222ENST00000590208 CPLX4Q7Z7G2 160 aa17.33■□□□□ 0.36
MBD1-222ENST00000590208 CERKQ8TCT0 537 aa17.33■□□□□ 0.36
MBD1-222ENST00000590208 ZNF384Q8TF68 577 aa17.33■□□□□ 0.36
MBD1-222ENST00000590208 DDX47Q9H0S4 455 aaKnown RBP17.33■□□□□ 0.36
MBD1-222ENST00000590208 SKAP2O75563 359 aaPredicted RBP17.32■□□□□ 0.36
MBD1-222ENST00000590208 STARD3NLO95772 234 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 SLC35G1Q2M3R5 365 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 LETM2Q2VYF4 491 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 RCSD1Q6JBY9 416 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 HEATR3Q7Z4Q2 680 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 TATDN2Q93075 761 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 RBAK-RBAKDNI3L0D1 243 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 NOL4O94818 638 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 CLSTN1O94985 981 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 FGRP09769 529 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 POLR2FP61218 127 aaKnown RBP17.32■□□□□ 0.36
MBD1-222ENST00000590208 XRCC4Q13426 336 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 TLDC1Q6P9B6 456 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 TEX11Q8IYF3 940 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 CCT6BQ92526 530 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 MMTAG2Q9BU76 263 aaKnown RBP17.32■□□□□ 0.36
MBD1-222ENST00000590208 BAIAP2L1Q9UHR4 511 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 TMEM59LQ9UK28 342 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 PCDHGC5Q9Y5F6 944 aa17.32■□□□□ 0.36
MBD1-222ENST00000590208 NKX1-1Q15270 411 aaPredicted RBP17.31■□□□□ 0.36
MBD1-222ENST00000590208 FAM83BQ5T0W9 1011 aa17.31■□□□□ 0.36
MBD1-222ENST00000590208 GKAP1Q5VSY0 366 aaPredicted RBP17.31■□□□□ 0.36
MBD1-222ENST00000590208 SFMBT2Q5VUG0 894 aa17.31■□□□□ 0.36
MBD1-222ENST00000590208 HIBCHQ6NVY1 386 aaPredicted RBP17.31■□□□□ 0.36
MBD1-222ENST00000590208 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.31■□□□□ 0.36
MBD1-222ENST00000590208 MYMKA6NI61 221 aa17.31■□□□□ 0.36
MBD1-222ENST00000590208 TSPY2A6NKD2 308 aa17.31■□□□□ 0.36
MBD1-222ENST00000590208 F8W031 263 aaPredicted RBP17.31■□□□□ 0.36
MBD1-222ENST00000590208 CEP104O60308 925 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms