RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 KIAA0753Q2KHM9 967 aa16.21■□□□□ 0.19
SF3A2-205ENST00000590034 C7orf31Q8N865 590 aa16.21■□□□□ 0.19
SF3A2-205ENST00000590034 IL31RAQ8NI17 732 aa16.21■□□□□ 0.19
SF3A2-205ENST00000590034 PDCD2LQ9BRP1 358 aa16.21■□□□□ 0.19
SF3A2-205ENST00000590034 AMNQ9BXJ7 453 aa16.21■□□□□ 0.19
SF3A2-205ENST00000590034 COG5Q9UP83 839 aa16.21■□□□□ 0.19
SF3A2-205ENST00000590034 HOXA13P31271 388 aaPredicted RBP16.2■□□□□ 0.18
SF3A2-205ENST00000590034 LAMC2Q13753 1193 aa16.2■□□□□ 0.18
SF3A2-205ENST00000590034 SEC23AQ15436 765 aa16.2■□□□□ 0.18
SF3A2-205ENST00000590034 HSDL1Q3SXM5 330 aa16.2■□□□□ 0.18
SF3A2-205ENST00000590034 ZNF618Q5T7W0 954 aa16.2■□□□□ 0.18
SF3A2-205ENST00000590034 MYSM1Q5VVJ2 828 aa16.2■□□□□ 0.18
SF3A2-205ENST00000590034 GPKOWQ92917 476 aaPredicted RBP eCLIP16.2■□□□□ 0.18
SF3A2-205ENST00000590034 KATNAL1Q9BW62 490 aa16.2■□□□□ 0.18
SF3A2-205ENST00000590034 MAD2L2Q9UI95 211 aa16.2■□□□□ 0.18
SF3A2-205ENST00000590034 MTUS1Q9ULD2 1270 aa16.2■□□□□ 0.18
SF3A2-205ENST00000590034 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
SF3A2-205ENST00000590034 PARNO95453 639 aaKnown RBP16.19■□□□□ 0.18
SF3A2-205ENST00000590034 MYCLP12524 364 aaPredicted RBP16.19■□□□□ 0.18
SF3A2-205ENST00000590034 SP2Q02086 613 aa16.19■□□□□ 0.18
SF3A2-205ENST00000590034 PTK7Q13308 1070 aa16.19■□□□□ 0.18
SF3A2-205ENST00000590034 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
SF3A2-205ENST00000590034 IFIT1BQ5T764 474 aaKnown RBP16.19■□□□□ 0.18
SF3A2-205ENST00000590034 STOX1Q6ZVD7 989 aa16.19■□□□□ 0.18
SF3A2-205ENST00000590034 CYB5R4Q7L1T6 521 aa16.19■□□□□ 0.18
SF3A2-205ENST00000590034 DHX37Q8IY37 1157 aaKnown RBP16.19■□□□□ 0.18
SF3A2-205ENST00000590034 HLA-CQ95604 372 aa16.19■□□□□ 0.18
SF3A2-205ENST00000590034 ZFP91Q96JP5 570 aaPredicted RBP16.19■□□□□ 0.18
SF3A2-205ENST00000590034 UBAC1Q9BSL1 405 aa16.19■□□□□ 0.18
SF3A2-205ENST00000590034 ZBED2Q9BTP6 218 aa16.19■□□□□ 0.18
SF3A2-205ENST00000590034 KRT23Q9C075 422 aa16.19■□□□□ 0.18
SF3A2-205ENST00000590034 RWDD1Q9H446 243 aaPredicted RBP16.19■□□□□ 0.18
SF3A2-205ENST00000590034 SUGCTQ9HAC7 445 aa16.19■□□□□ 0.18
SF3A2-205ENST00000590034 ABHD14A-ACY1A0A1B0GW23 586 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 LINC01553A4QN01 128 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 PALM3A6NDB9 673 aaPredicted RBP16.18■□□□□ 0.18
SF3A2-205ENST00000590034 ZBTB5O15062 677 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 GGPS1O95749 300 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 UBA1P22314 1058 aaKnown RBP16.18■□□□□ 0.18
SF3A2-205ENST00000590034 PGM5Q15124 567 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 CELF3Q5SZQ8 465 aaKnown RBP16.18■□□□□ 0.18
SF3A2-205ENST00000590034 FAM117BQ6P1L5 589 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 VSIG10LQ86VR7 867 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 KHSRPQ92945 711 aaKnown RBP eCLIP16.18■□□□□ 0.18
SF3A2-205ENST00000590034 RAD9AQ99638 391 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 C16orf70Q9BSU1 422 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 BCAS3Q9H6U6 928 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 PCDHA1Q9Y5I3 950 aa16.18■□□□□ 0.18
SF3A2-205ENST00000590034 HIP1O00291 1037 aa16.17■□□□□ 0.18
SF3A2-205ENST00000590034 PPFIA4O75335 1185 aa16.17■□□□□ 0.18
SF3A2-205ENST00000590034 ERVK-21P61565 698 aa16.17■□□□□ 0.18
SF3A2-205ENST00000590034 AAMPQ13685 434 aa16.17■□□□□ 0.18
SF3A2-205ENST00000590034 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.17■□□□□ 0.18
SF3A2-205ENST00000590034 SPATA33Q96N06 139 aa16.17■□□□□ 0.18
SF3A2-205ENST00000590034 EPHX3Q9H6B9 360 aa16.17■□□□□ 0.18
SF3A2-205ENST00000590034 CNNM2Q9H8M5 875 aa16.17■□□□□ 0.18
SF3A2-205ENST00000590034 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
SF3A2-205ENST00000590034 CTNNA3Q9UI47 895 aa16.17■□□□□ 0.18
SF3A2-205ENST00000590034 CYTH3O43739 400 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 LGR5O75473 907 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 HOXC8P31273 242 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 IKBKEQ14164 716 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 SERINC5Q86VE9 423 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 HOMER1Q86YM7 354 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 TGS1Q96RS0 853 aaKnown RBP16.16■□□□□ 0.18
SF3A2-205ENST00000590034 PIGSQ96S52 555 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 C1QTNF1Q9BXJ1 281 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 OSBPL7Q9BZF2 842 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 LMCD1Q9NZU5 365 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 NLRC5Q86WI3 1866 aa16.16■□□□□ 0.18
SF3A2-205ENST00000590034 EFCAB14O75071 495 aa16.15■□□□□ 0.18
SF3A2-205ENST00000590034 PLA2G5P39877 138 aa16.15■□□□□ 0.18
SF3A2-205ENST00000590034 THPOP40225 353 aa16.15■□□□□ 0.18
SF3A2-205ENST00000590034 GRM4Q14833 912 aa16.15■□□□□ 0.18
SF3A2-205ENST00000590034 DBF4BQ8NFT6 615 aa16.15■□□□□ 0.18
SF3A2-205ENST00000590034 C17orf80Q9BSJ5 609 aa16.15■□□□□ 0.18
SF3A2-205ENST00000590034 RIOX1Q9H6W3 641 aa16.15■□□□□ 0.18
SF3A2-205ENST00000590034 CD320Q9NPF0 282 aa16.15■□□□□ 0.18
SF3A2-205ENST00000590034 MAP3K20Q9NYL2 800 aaKnown RBP16.15■□□□□ 0.18
SF3A2-205ENST00000590034 TAF6LQ9Y6J9 622 aa16.15■□□□□ 0.18
SF3A2-205ENST00000590034 ATG2AQ2TAZ0 1938 aa16.15■□□□□ 0.18
SF3A2-205ENST00000590034 MYO7AQ13402 2215 aa16.14■□□□□ 0.17
SF3A2-205ENST00000590034 LGALS2P05162 132 aa16.14■□□□□ 0.17
SF3A2-205ENST00000590034 GSPT1P15170 499 aaKnown RBP16.14■□□□□ 0.17
SF3A2-205ENST00000590034 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.17
SF3A2-205ENST00000590034 FCHSD1Q86WN1 690 aa16.14■□□□□ 0.17
SF3A2-205ENST00000590034 EXOC6Q8TAG9 804 aa16.14■□□□□ 0.17
SF3A2-205ENST00000590034 C11orf16Q9NQ32 467 aa16.14■□□□□ 0.17
SF3A2-205ENST00000590034 TELO2Q9Y4R8 837 aa16.14■□□□□ 0.17
SF3A2-205ENST00000590034 FRMPD4Q14CM0 1322 aa16.14■□□□□ 0.17
SF3A2-205ENST00000590034 EMSYQ7Z589 1322 aa16.14■□□□□ 0.17
SF3A2-205ENST00000590034 RSPH10B2B2RC85 870 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 H3BRB1 525 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 GCOM1H8Y6P7 765 aaPredicted RBP16.13■□□□□ 0.17
SF3A2-205ENST00000590034 TREHO43280 583 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 RSPH10BP0C881 870 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 POLR2MP0CAP2 368 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 SMIM10L2AP0DMW4 78 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 SMIM10L2BP0DMW5 78 aa16.13■□□□□ 0.17
SF3A2-205ENST00000590034 TGFB3P10600 412 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms