RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 MAST3O60307 1309 aa12.9□□□□□ -0.34
TREM1-206ENST00000589882 CYP27B1O15528 508 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 SART1O43290 800 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 TMCC1O94876 653 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 CCDC166P0CW27 439 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 HNRNPH3P31942 346 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 TUBP50607 506 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 SCNN1BP51168 640 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 RAD23BP54727 409 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 PARP6Q2NL67 630 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 Q4G0T1 1027 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 FBXO31Q5XUX0 539 aaPredicted RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 LRRC34Q8IZ02 419 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 STK32AQ8WU08 396 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 FERMT2Q96AC1 680 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 GBP5Q96PP8 586 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 TIPINQ9BVW5 301 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 STMN4Q9H169 189 aaPredicted RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 ARHGEF10LQ9HCE6 1279 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 LUC7LQ9NQ29 371 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 GALNT8Q9NY28 637 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 ANGEL1Q9UNK9 670 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 RPL26L1Q9UNX3 145 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 WDR37Q9Y2I8 494 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 LRCH1Q9Y2L9 728 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 PARP4Q9UKK3 1724 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 ZSCAN5CA6NGD5 496 aaPredicted RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 GTPBP6O43824 516 aaPredicted RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 ATP5HO75947 161 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 MMP1P03956 469 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 CHN1P15882 459 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 RFC5P40937 340 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 TOB1P50616 345 aaPredicted RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 GRIN1Q05586 938 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 SSRP1Q08945 709 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 PABPC4Q13310 644 aaKnown RBP eCLIP12.89□□□□□ -0.35
TREM1-206ENST00000589882 RASA3Q14644 834 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 EPHA10Q5JZY3 1008 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 ENDOVQ8N8Q3 282 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 IL17REQ8NFR9 667 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 OR2W6PQ8NHA6 318 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 WDR66Q8TBY9 1149 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 ATXN2LQ8WWM7 1075 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 LTV1Q96GA3 475 aaPredicted RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 MAF1Q9H063 256 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 TXLNGQ9NUQ3 528 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 CYP39A1Q9NYL5 469 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 EHD2Q9NZN4 543 aa12.89□□□□□ -0.35
TREM1-206ENST00000589882 LARSQ9P2J5 1176 aaKnown RBP12.89□□□□□ -0.35
TREM1-206ENST00000589882 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
TREM1-206ENST00000589882 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
TREM1-206ENST00000589882 RAD51CO43502 376 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 DDX58O95786 925 aaKnown RBP12.88□□□□□ -0.35
TREM1-206ENST00000589882 OAS1P00973 400 aaKnown RBP12.88□□□□□ -0.35
TREM1-206ENST00000589882 SKIP12755 728 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 CCNB1P14635 433 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 YY1P25490 414 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 MMP13P45452 471 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 ANTXR2P58335 489 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 ASAP3Q8TDY4 903 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 NCSTNQ92542 709 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 PTPRN2Q92932 1015 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 PGM2Q96G03 612 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 TSPAN18Q96SJ8 248 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 PSMB7Q99436 277 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 FAM114A2Q9NRY5 505 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 FBXL5Q9UKA1 691 aa12.88□□□□□ -0.35
TREM1-206ENST00000589882 NCK2O43639 380 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 SNX3O60493 162 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 KIF11P52732 1056 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 PLS1Q14651 629 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 DIXDC1Q155Q3 683 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 MUM1Q2TAK8 710 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 KLHDC7AQ5VTJ3 777 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 DIS3L2Q8IYB7 885 aaKnown RBP12.87□□□□□ -0.35
TREM1-206ENST00000589882 AGGF1Q8N302 714 aaeCLIP12.87□□□□□ -0.35
TREM1-206ENST00000589882 RBBP8NLQ8NC74 664 aaPredicted RBP12.87□□□□□ -0.35
TREM1-206ENST00000589882 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 MIS12Q9H081 205 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 RXFP1Q9HBX9 757 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 ATP8A2Q9NTI2 1148 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 INTS9Q9NV88 658 aaKnown RBP12.87□□□□□ -0.35
TREM1-206ENST00000589882 A8MUI8 341 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 F8VZ95 297 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 ZNF263O14978 683 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 AKR1B10O60218 316 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 FAM200BP0CF97 657 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 RPL13P26373 211 aaKnown RBP12.87□□□□□ -0.35
TREM1-206ENST00000589882 RXRBP28702 533 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 ECHS1P30084 290 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 ZC3H6P61129 1189 aaKnown RBP12.87□□□□□ -0.35
TREM1-206ENST00000589882 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 CCDC15Q0P6D6 951 aa12.87□□□□□ -0.35
TREM1-206ENST00000589882 RNF220Q5VTB9 566 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms