RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	PKD2L1	Q9P0L9	805 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	ATP9A	O75110	1047 aa		13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	GGPS1	O95749	300 aa		13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	ASGR1	P07306	291 aa		13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	COL6A1	P12109	1028 aa		13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	UBA1	P22314	1058 aa	Known RBP	13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	CST5	P28325	142 aa	Predicted RBP	13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	ATN1	P54259	1190 aa	Predicted RBP	13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	HMGN5	P82970	282 aa	Known RBP	13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	ARHGAP1	Q07960	439 aa		13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	MCTP2	Q6DN12	878 aa		13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	GALNT17	Q6IS24	598 aa		13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	DHX37	Q8IY37	1157 aa	Known RBP	13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	TBCK	Q8TEA7	893 aa		13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	AFG1L	Q8WV93	481 aa		13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	PHF24	Q9UPV7	400 aa		13.6	□□□□□ -0.23
RFX2-215	ENST00000589742	MKI67	P46013	3256 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	FIBP	O43427	364 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	MYL3	P08590	195 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	AR	P10275	920 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	TGFB3	P10600	412 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	KRT2	P35908	639 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	ACLY	P53396	1101 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	NKX3-2	P78367	333 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	MLLT1	Q03111	559 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	NR5A1	Q13285	461 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	MTMR1	Q13613	665 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	TRIM29	Q14134	588 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	EARS2	Q5JPH6	523 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	CELF3	Q5SZQ8	465 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	KCNV1	Q6PIU1	500 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	CXCL17	Q6UXB2	119 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	FAM177A1	Q8N128	213 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	PCSK9	Q8NBP7	692 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	CRYGN	Q8WXF5	182 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	VTI1A	Q96AJ9	217 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	C8orf76	Q96K31	380 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	TSEN34	Q9BSV6	310 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	MLXIP	Q9HAP2	919 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	TELO2	Q9Y4R8	837 aa		13.59	□□□□□ -0.23
RFX2-215	ENST00000589742	MYH7B	A7E2Y1	1941 aa		13.58	□□□□□ -0.23
RFX2-215	ENST00000589742		A0A1W2PQ45	241 aa	Predicted RBP	13.58	□□□□□ -0.24
RFX2-215	ENST00000589742		A0A1W2PQY0	241 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	FAM205C	A6NFA0	338 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	BTBD18	B2RXH4	712 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	FAM86B1	E9PN63	330 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	MEIS1	O00470	390 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	ZEB2	O60315	1214 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	MMP1	P03956	469 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	CYP3A4	P08684	503 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	FAM86B2	P0C5J1	330 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	GJB2	P29033	226 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	SP4	Q02446	784 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	LAMC2	Q13753	1193 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	INF2	Q27J81	1249 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	LRRC26	Q2I0M4	334 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	CEP55	Q53EZ4	464 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	MYSM1	Q5VVJ2	828 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	PIK3AP1	Q6ZUJ8	805 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	CYFIP1	Q7L576	1253 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	KRT25	Q7Z3Z0	450 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	PLA2G4D	Q86XP0	818 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	DIS3L2	Q8IYB7	885 aa	Known RBP	13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	DPF3	Q92784	378 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	GPRASP2	Q96D09	838 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	SPATA33	Q96N06	139 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	KCNH7	Q9NS40	1196 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	FOXD4L1	Q9NU39	408 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	SMC3	Q9UQE7	1217 aa		13.58	□□□□□ -0.24
RFX2-215	ENST00000589742	CCDC194	A0A1B0GVG4	234 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	MOXD2P	A6NHM9	499 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742		A6NJR5	290 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	KCNA2	P16389	499 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	CPT1A	P50416	773 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	PSMC6	P62333	389 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	CUL4A	Q13619	759 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	NEDD9	Q14511	834 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	NONO	Q15233	471 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	HSDL1	Q3SXM5	330 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	PRR16	Q569H4	304 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	SLC39A5	Q6ZMH5	540 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	PPP1R13L	Q8WUF5	828 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	HTATIP2	Q9BUP3	242 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	BRMS1	Q9HCU9	246 aa		13.57	□□□□□ -0.24
RFX2-215	ENST00000589742	IGLV3-22	A0A075B6J6	115 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742		K7ELQ4	463 aa	Predicted RBP	13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	MAFG	O15525	162 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	TDP2	O95551	362 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	MMP3	P08254	477 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	CIITA	P33076	1130 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	USP11	P51784	963 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	CHMP4BP1	P59074	171 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	LETM2	Q2VYF4	491 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	BRDT	Q58F21	947 aa	Predicted RBP	13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	FBXO18	Q8NFZ0	1043 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	TNFRSF25	Q93038	417 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	SNX21	Q969T3	373 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	EMID1	Q96A84	441 aa	Predicted RBP	13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	CDHR1	Q96JP9	859 aa		13.56	□□□□□ -0.24
RFX2-215	ENST00000589742	GLT1D1	Q96MS3	346 aa		13.56	□□□□□ -0.24

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