RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 DENND4AQ7Z401 1863 aa7.28□□□□□ -1.24
VPS25-204ENST00000589577 EMSYQ7Z589 1322 aa7.27□□□□□ -1.24
VPS25-204ENST00000589577 ADGRA3Q8IWK6 1321 aa7.27□□□□□ -1.24
VPS25-204ENST00000589577 NBEAQ8NFP9 2946 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 TMEM232C9JQI7 657 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 HAS3O00219 553 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 NFIBO00712 420 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 MBD4O95243 580 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 LMNAP02545 664 aaKnown RBP7.27□□□□□ -1.25
VPS25-204ENST00000589577 ITGB1P05556 798 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 SP100P23497 879 aaPredicted RBP7.27□□□□□ -1.25
VPS25-204ENST00000589577 NRIP1P48552 1158 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 CLCN5P51795 746 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 ARHGAP1Q07960 439 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 MTMR3Q13615 1198 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 BAATQ14032 418 aaPredicted RBP7.27□□□□□ -1.25
VPS25-204ENST00000589577 ACAP1Q15027 740 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 ANGPT1Q15389 498 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 RSPO4Q2I0M5 234 aaPredicted RBP7.27□□□□□ -1.25
VPS25-204ENST00000589577 BRDTQ58F21 947 aaPredicted RBP7.27□□□□□ -1.25
VPS25-204ENST00000589577 CCDC62Q6P9F0 684 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 SLC30A10Q6XR72 485 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 RASGRP2Q7LDG7 609 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 RPAP2Q8IXW5 612 aaPredicted RBP7.27□□□□□ -1.25
VPS25-204ENST00000589577 CCDC105Q8IYK2 499 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 FIBCD1Q8N539 461 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 DCLK2Q8N568 766 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 GMCL1P1Q8NEA9 526 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 ATP8B4Q8TF62 1192 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 SCFD2Q8WU76 684 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 MKL1Q969V6 931 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 IL17RAQ96F46 866 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 CDH22Q9UJ99 828 aa7.27□□□□□ -1.25
VPS25-204ENST00000589577 LOC102724159A0A0B4J2E5 919 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 RSPH10B2B2RC85 870 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 F2P00734 622 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 RSPH10BP0C881 870 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 FDX1P10109 184 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 TXNP10599 105 aaKnown RBP7.26□□□□□ -1.25
VPS25-204ENST00000589577 BMP3P12645 472 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 NPR3P17342 541 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 STAT2P52630 851 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 PWP2Q15269 919 aaKnown RBP7.26□□□□□ -1.25
VPS25-204ENST00000589577 ZBTB33Q86T24 672 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 RBM23Q86U06 439 aaKnown RBP7.26□□□□□ -1.25
VPS25-204ENST00000589577 SERINC5Q86VE9 423 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 UBALD2Q8IYN6 164 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 CRIPAKQ8N1N5 446 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 CYP2W1Q8TAV3 490 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 SSH3Q8TE77 659 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 ZNF689Q96CS4 500 aaPredicted RBP7.26□□□□□ -1.25
VPS25-204ENST00000589577 CEP95Q96GE4 821 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 S1PR5Q9H228 398 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 SORCS3Q9UPU3 1222 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 R4GN57 208 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 LOC400499M0QZD8 3231 aa7.26□□□□□ -1.25
VPS25-204ENST00000589577 ASH1LQ9NR48 2969 aaKnown RBP7.25□□□□□ -1.25
VPS25-204ENST00000589577 GNAI2P04899 355 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 ZNF286BP0CG31 522 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 AOC1P19801 751 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 THPOP40225 353 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 PSEN2P49810 448 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 CACNB1Q02641 598 aaPredicted RBP7.25□□□□□ -1.25
VPS25-204ENST00000589577 PDE4BQ07343 736 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 KCNC3Q14003 757 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 SLFN13Q68D06 897 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 STK11IPQ8N1F8 1099 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 C7orf31Q8N865 590 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 SPPL3Q8TCT6 385 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 KCNG4Q8TDN1 519 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 SEPT8Q92599 483 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 P2RX5Q93086 422 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 CHMP4CQ96CF2 233 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 ALG1Q9BT22 464 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 PLVAPQ9BX97 442 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 API5Q9BZZ5 524 aaKnown RBP7.25□□□□□ -1.25
VPS25-204ENST00000589577 MTMR4Q9NYA4 1195 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 ADD3Q9UEY8 706 aaKnown RBP7.25□□□□□ -1.25
VPS25-204ENST00000589577 CCPG1Q9ULG6 757 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 PRR12Q9ULL5 1215 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 SYNPO2Q9UMS6 1093 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 TNNQ9UQP3 1299 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 RWDD3Q9Y3V2 267 aa7.25□□□□□ -1.25
VPS25-204ENST00000589577 FNDC1Q4ZHG4 1894 aaPredicted RBP7.24□□□□□ -1.25
VPS25-204ENST00000589577 PLIN4Q96Q06 1357 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 C2CD4DB7Z1M9 353 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 PER2O15055 1255 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 IPO8O15397 1037 aaKnown RBP7.24□□□□□ -1.25
VPS25-204ENST00000589577 SURF6O75683 361 aaKnown RBP7.24□□□□□ -1.25
VPS25-204ENST00000589577 ICAM1P05362 532 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 NEFLP07196 543 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 ASGR2P07307 311 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 ADRB1P08588 477 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 MS4A1P11836 297 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 HOXC8P31273 242 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 ADD2P35612 726 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 ATXN1P54253 815 aaKnown RBP7.24□□□□□ -1.25
VPS25-204ENST00000589577 PDE4DQ08499 809 aa7.24□□□□□ -1.25
VPS25-204ENST00000589577 OS9Q13438 667 aaPredicted RBP7.24□□□□□ -1.25
VPS25-204ENST00000589577 MFSD10Q14728 455 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms